RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 C7orf31Q8N865 590 aa26.26■■□□□ 1.79
CAPN1-222ENST00000532285 CCDC148Q8NFR7 591 aa26.26■■□□□ 1.79
CAPN1-222ENST00000532285 PGBD1Q96JS3 809 aa26.26■■□□□ 1.79
CAPN1-222ENST00000532285 MXRA8Q9BRK3 442 aa26.26■■□□□ 1.79
CAPN1-222ENST00000532285 ALG1Q9BT22 464 aa26.26■■□□□ 1.79
CAPN1-222ENST00000532285 NOD1Q9Y239 953 aa26.26■■□□□ 1.79
CAPN1-222ENST00000532285 UMODL1Q5DID0 1318 aa26.25■■□□□ 1.79
CAPN1-222ENST00000532285 SREBF1P36956 1147 aa26.25■■□□□ 1.79
CAPN1-222ENST00000532285 PTGISQ16647 500 aa26.25■■□□□ 1.79
CAPN1-222ENST00000532285 GPR153Q6NV75 609 aa26.25■■□□□ 1.79
CAPN1-222ENST00000532285 BICD2Q8TD16 824 aa26.25■■□□□ 1.79
CAPN1-222ENST00000532285 GPR20Q99678 358 aa26.25■■□□□ 1.79
CAPN1-222ENST00000532285 C16orf70Q9BSU1 422 aa26.25■■□□□ 1.79
CAPN1-222ENST00000532285 SH3GLB2Q9NR46 395 aa26.25■■□□□ 1.79
CAPN1-222ENST00000532285 ATP9AO75110 1047 aa26.24■■□□□ 1.79
CAPN1-222ENST00000532285 KCNA2P16389 499 aa26.24■■□□□ 1.79
CAPN1-222ENST00000532285 JAKMIP3Q5VZ66 844 aa26.24■■□□□ 1.79
CAPN1-222ENST00000532285 GDF6Q6KF10 455 aaPredicted RBP26.24■■□□□ 1.79
CAPN1-222ENST00000532285 REXO1Q8N1G1 1221 aaKnown RBP26.24■■□□□ 1.79
CAPN1-222ENST00000532285 SLKQ9H2G2 1235 aaPredicted RBP26.24■■□□□ 1.79
CAPN1-222ENST00000532285 HDAC6Q9UBN7 1215 aa26.24■■□□□ 1.79
CAPN1-222ENST00000532285 GTF2IRD1Q9UHL9 959 aa26.24■■□□□ 1.79
CAPN1-222ENST00000532285 KAT6AQ92794 2004 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 H3BRB1 525 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 DEXIO95424 95 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 LGALS2P05162 132 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 CCL23P55773 120 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 CEP55Q53EZ4 464 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 RNPC3Q96LT9 517 aaKnown RBP26.23■■□□□ 1.79
CAPN1-222ENST00000532285 WNT8AQ9H1J5 351 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 TUT1Q9H6E5 874 aaKnown RBP26.23■■□□□ 1.79
CAPN1-222ENST00000532285 IL23AQ9NPF7 189 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 VPS54Q9P1Q0 977 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 TPCN1Q9ULQ1 816 aa26.23■■□□□ 1.79
CAPN1-222ENST00000532285 PITPNM1O00562 1244 aa26.22■■□□□ 1.79
CAPN1-222ENST00000532285 AK2P54819 239 aa26.22■■□□□ 1.79
CAPN1-222ENST00000532285 ARHGAP4P98171 946 aa26.22■■□□□ 1.79
CAPN1-222ENST00000532285 BFSP2Q13515 415 aa26.22■■□□□ 1.79
CAPN1-222ENST00000532285 TMEM240Q5SV17 173 aa26.22■■□□□ 1.79
CAPN1-222ENST00000532285 C16orf59Q7L2K0 433 aa26.22■■□□□ 1.79
CAPN1-222ENST00000532285 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.22■■□□□ 1.79
CAPN1-222ENST00000532285 KCNH7Q9NS40 1196 aa26.22■■□□□ 1.79
CAPN1-222ENST00000532285 SCN5AQ14524 2016 aa26.22■■□□□ 1.79
CAPN1-222ENST00000532285 TANC1Q9C0D5 1861 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 PFKFB2O60825 505 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 CDKL5O76039 1030 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 ZNF76P36508 570 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 SP4Q02446 784 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 SCRN1Q12765 414 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 PSRC1Q6PGN9 363 aaPredicted RBP26.21■■□□□ 1.79
CAPN1-222ENST00000532285 NIPA1Q7RTP0 329 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 RPUSD2Q8IZ73 545 aaKnown RBP26.21■■□□□ 1.79
CAPN1-222ENST00000532285 CCDC155Q8N6L0 562 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 RETREG2Q8NC44 543 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 CYP2W1Q8TAV3 490 aa26.21■■□□□ 1.79
CAPN1-222ENST00000532285 MEIS1O00470 390 aa26.2■■□□□ 1.78
CAPN1-222ENST00000532285 ADAMTS3O15072 1205 aa26.2■■□□□ 1.78
CAPN1-222ENST00000532285 CYP3A4P08684 503 aa26.2■■□□□ 1.78
CAPN1-222ENST00000532285 ACRP10323 421 aa26.2■■□□□ 1.78
CAPN1-222ENST00000532285 C8orf34Q49A92 452 aa26.2■■□□□ 1.78
CAPN1-222ENST00000532285 FAM177A1Q8N128 213 aaPredicted RBP26.2■■□□□ 1.78
CAPN1-222ENST00000532285 CTAGE1Q96RT6 745 aa26.2■■□□□ 1.78
CAPN1-222ENST00000532285 PKD2L1Q9P0L9 805 aa26.2■■□□□ 1.78
CAPN1-222ENST00000532285 NEK4P51957 841 aa26.19■■□□□ 1.78
CAPN1-222ENST00000532285 NLRP5P59047 1200 aa26.19■■□□□ 1.78
CAPN1-222ENST00000532285 ZNF365Q70YC5 407 aa26.19■■□□□ 1.78
CAPN1-222ENST00000532285 CAGE1Q8TC20 777 aa26.19■■□□□ 1.78
CAPN1-222ENST00000532285 CRYGNQ8WXF5 182 aa26.19■■□□□ 1.78
CAPN1-222ENST00000532285 SEPT1Q8WYJ6 367 aa26.19■■□□□ 1.78
CAPN1-222ENST00000532285 SCLYQ96I15 445 aa26.19■■□□□ 1.78
CAPN1-222ENST00000532285 ZNF215Q9UL58 517 aaPredicted RBP26.19■■□□□ 1.78
CAPN1-222ENST00000532285 TELO2Q9Y4R8 837 aa26.19■■□□□ 1.78
CAPN1-222ENST00000532285 NFASCO94856 1347 aa26.18■■□□□ 1.78
CAPN1-222ENST00000532285 ARP10275 920 aa26.18■■□□□ 1.78
CAPN1-222ENST00000532285 TCF7P36402 384 aaPredicted RBP26.18■■□□□ 1.78
CAPN1-222ENST00000532285 UTP14CQ5TAP6 766 aaKnown RBP26.18■■□□□ 1.78
CAPN1-222ENST00000532285 SDF4Q9BRK5 362 aa26.18■■□□□ 1.78
CAPN1-222ENST00000532285 FGBP02675 491 aa26.17■■□□□ 1.78
CAPN1-222ENST00000532285 RFC2P35250 354 aa26.17■■□□□ 1.78
CAPN1-222ENST00000532285 PTK7Q13308 1070 aa26.17■■□□□ 1.78
CAPN1-222ENST00000532285 AGO4Q9HCK5 861 aaKnown RBP26.17■■□□□ 1.78
CAPN1-222ENST00000532285 JPH1Q9HDC5 661 aaPredicted RBP26.17■■□□□ 1.78
CAPN1-222ENST00000532285 SLC9A2Q9UBY0 812 aa26.17■■□□□ 1.78
CAPN1-222ENST00000532285 GSTTP1A0A1W2PQM5 241 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 PFKMP08237 780 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 IQCF3P0C7M6 154 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 SMIM10L2AP0DMW4 78 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 SMIM10L2BP0DMW5 78 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 SMAD3P84022 425 aaKnown RBP26.16■■□□□ 1.78
CAPN1-222ENST00000532285 PLA2G4DQ86XP0 818 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 TRIM50Q86XT4 487 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 RASGRP4Q8TDF6 673 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 AFAP1L1Q8TED9 768 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 MTIF3Q9H2K0 278 aaKnown RBP26.16■■□□□ 1.78
CAPN1-222ENST00000532285 PCDHA4Q9UN74 947 aa26.16■■□□□ 1.78
CAPN1-222ENST00000532285 STK36Q9NRP7 1315 aa26.15■■□□□ 1.78
CAPN1-222ENST00000532285 C17orf102A2RUQ5 167 aa26.15■■□□□ 1.78
CAPN1-222ENST00000532285 FAM86B1E9PN63 330 aa26.15■■□□□ 1.78
CAPN1-222ENST00000532285 FAM86B2P0C5J1 330 aa26.15■■□□□ 1.78
CAPN1-222ENST00000532285 ZNF200P98182 395 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms