RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ATXN2LQ8WWM7 1075 aaKnown RBP19.38■□□□□ 0.69
CPSF1-207ENST00000531727 USP26Q9BXU7 913 aa19.38■□□□□ 0.69
CPSF1-207ENST00000531727 THEGQ9P2T0 379 aa19.38■□□□□ 0.69
CPSF1-207ENST00000531727 SLC12A7Q9Y666 1083 aa19.38■□□□□ 0.69
CPSF1-207ENST00000531727 ABHD14A-ACY1A0A1B0GW23 586 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 C17orf102A2RUQ5 167 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 TLL1O43897 1013 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 ARHGEF15O94989 841 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 DEFB103AP81534 67 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 TAP1Q03518 808 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 TCTN1Q2MV58 587 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 CENPQQ7L2Z9 268 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-207ENST00000531727 SGMS1Q86VZ5 419 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 GPR20Q99678 358 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 SENP7Q9BQF6 1050 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 LRRC2Q9BYS8 371 aa19.37■□□□□ 0.69
CPSF1-207ENST00000531727 TRANK1O15050 2925 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 EMSYQ7Z589 1322 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 EFCAB14O75071 495 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 SMIM10L2AP0DMW4 78 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 SMIM10L2BP0DMW5 78 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 MBTPS1Q14703 1052 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 NLRX1Q86UT6 975 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 RAB11FIP4Q86YS3 637 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 FANCBQ8NB91 859 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 ATP6V0A1Q93050 837 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 PSTPIP2Q9H939 334 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 CERS4Q9HA82 394 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 MYO9BQ13459 2157 aa19.36■□□□□ 0.69
CPSF1-207ENST00000531727 REV3LO60673 3130 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 EPOPA6NHQ4 379 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 RFXAPO00287 272 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 POU3F3P20264 500 aaPredicted RBP19.35■□□□□ 0.69
CPSF1-207ENST00000531727 THPOP40225 353 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 IKBKEQ14164 716 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 RNF20Q5VTR2 975 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 TMTC3Q6ZXV5 915 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 SKAP1Q86WV1 359 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 ZBED2Q9BTP6 218 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 RNPEPQ9H4A4 650 aa19.35■□□□□ 0.69
CPSF1-207ENST00000531727 ZNF215Q9UL58 517 aaPredicted RBP19.35■□□□□ 0.69
CPSF1-207ENST00000531727 hCG_1642624A0A1W2PR95 340 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 RSPH10B2B2RC85 870 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 TREHO43280 583 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 GTPBP6O43824 516 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-207ENST00000531727 LGR5O75473 907 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 RSPH10BP0C881 870 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 TMCO2Q7Z6W1 182 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-207ENST00000531727 MICU3Q86XE3 530 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 MICALL1Q8N3F8 863 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 CCDC82Q8N4S0 544 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 GIMAP8Q8ND71 665 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-207ENST00000531727 ARNTL2Q8WYA1 636 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 GPRASP2Q96D09 838 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 ASB2Q96Q27 587 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 TELO2Q9Y4R8 837 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 MTCH2Q9Y6C9 303 aa19.34■□□□□ 0.69
CPSF1-207ENST00000531727 COL4A4P53420 1690 aaPredicted RBP19.33■□□□□ 0.69
CPSF1-207ENST00000531727 LCHNA4D1U4 455 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 GJB5O95377 273 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 GNAT1P11488 350 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 MRPS5P82675 430 aaKnown RBP19.33■□□□□ 0.68
CPSF1-207ENST00000531727 UBE2SQ16763 222 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 APOA5Q6Q788 366 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 SYNE3Q6ZMZ3 975 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 TRIM50Q86XT4 487 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 CDHR1Q96JP9 859 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 NEK1Q96PY6 1258 aa19.33■□□□□ 0.68
CPSF1-207ENST00000531727 TSPYL2Q9H2G4 693 aaPredicted RBP19.33■□□□□ 0.68
CPSF1-207ENST00000531727 SPDYE3A6NKU9 549 aa19.32■□□□□ 0.68
CPSF1-207ENST00000531727 CAND2O75155 1236 aa19.32■□□□□ 0.68
CPSF1-207ENST00000531727 SP4Q02446 784 aa19.32■□□□□ 0.68
CPSF1-207ENST00000531727 UTP14CQ5TAP6 766 aaKnown RBP19.32■□□□□ 0.68
CPSF1-207ENST00000531727 HEATR3Q7Z4Q2 680 aa19.32■□□□□ 0.68
CPSF1-207ENST00000531727 SPRED2Q7Z698 418 aa19.32■□□□□ 0.68
CPSF1-207ENST00000531727 RAD9AQ99638 391 aa19.32■□□□□ 0.68
CPSF1-207ENST00000531727 SETD4Q9NVD3 440 aa19.32■□□□□ 0.68
CPSF1-207ENST00000531727 UBIAD1Q9Y5Z9 338 aa19.32■□□□□ 0.68
CPSF1-207ENST00000531727 MICAL3Q7RTP6 2002 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 RBAK-RBAKDNI3L0D1 243 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 ATP9AO75110 1047 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 KCNA2P16389 499 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 ITGB5P18084 799 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 ADAM17P78536 824 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 EXOSC10Q01780 885 aaKnown RBP19.31■□□□□ 0.68
CPSF1-207ENST00000531727 MKRN4PQ13434 485 aaPredicted RBP19.31■□□□□ 0.68
CPSF1-207ENST00000531727 TSGA10IPQ3SY00 556 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 PLEKHG4Q58EX7 1191 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 DBF4BQ8NFT6 615 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 RBM28Q9NW13 759 aaKnown RBP19.31■□□□□ 0.68
CPSF1-207ENST00000531727 PCDHA6Q9UN73 950 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 PCDHA8Q9Y5H6 950 aa19.31■□□□□ 0.68
CPSF1-207ENST00000531727 CNTNAP5Q8WYK1 1306 aa19.3■□□□□ 0.68
CPSF1-207ENST00000531727 CDC45O75419 566 aa19.3■□□□□ 0.68
CPSF1-207ENST00000531727 TCF7P36402 384 aaPredicted RBP19.3■□□□□ 0.68
CPSF1-207ENST00000531727 GRB10Q13322 594 aa19.3■□□□□ 0.68
CPSF1-207ENST00000531727 MTMR1Q13613 665 aa19.3■□□□□ 0.68
CPSF1-207ENST00000531727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.3■□□□□ 0.68
CPSF1-207ENST00000531727 DHX32Q7L7V1 743 aaKnown RBP19.3■□□□□ 0.68
CPSF1-207ENST00000531727 LMBR1Q8WVP7 490 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms