RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ARHGEF15O94989 841 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 HOXC8P31273 242 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 TAP1Q03518 808 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 TCTN1Q2MV58 587 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 BMP2KLQ5H9B9 411 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 SERINC5Q86VE9 423 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 GPR20Q99678 358 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 LRRC2Q9BYS8 371 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 CERS4Q9HA82 394 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 THEGQ9P2T0 379 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 SLC12A7Q9Y666 1083 aa18.18■□□□□ 0.5
CPSF1-205ENST00000531042 ABHD14A-ACY1A0A1B0GW23 586 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 C17orf102A2RUQ5 167 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 RFXAPO00287 272 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 DEFB103AP81534 67 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 MBTPS1Q14703 1052 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 SGMS1Q86VZ5 419 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 SKAP1Q86WV1 359 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 RAB11FIP4Q86YS3 637 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 FANCBQ8NB91 859 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 ATXN2LQ8WWM7 1075 aaKnown RBP18.17■□□□□ 0.5
CPSF1-205ENST00000531042 ATP6V0A1Q93050 837 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 SENP7Q9BQF6 1050 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
CPSF1-205ENST00000531042 EPOPA6NHQ4 379 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 TLL1O43897 1013 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 SMIM10L2AP0DMW4 78 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 SMIM10L2BP0DMW5 78 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 POU3F3P20264 500 aaPredicted RBP18.16■□□□□ 0.5
CPSF1-205ENST00000531042 IKBKEQ14164 716 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 TMTC3Q6ZXV5 915 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 CENPQQ7L2Z9 268 aaPredicted RBP18.16■□□□□ 0.5
CPSF1-205ENST00000531042 TMCO2Q7Z6W1 182 aaPredicted RBP18.16■□□□□ 0.5
CPSF1-205ENST00000531042 NLRX1Q86UT6 975 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 RNPEPQ9H4A4 650 aa18.16■□□□□ 0.5
CPSF1-205ENST00000531042 hCG_1642624A0A1W2PR95 340 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 RSPH10B2B2RC85 870 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 TREHO43280 583 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 EFCAB14O75071 495 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 RSPH10BP0C881 870 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 THPOP40225 353 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 RNF20Q5VTR2 975 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 MICALL1Q8N3F8 863 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 ARNTL2Q8WYA1 636 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 TELO2Q9Y4R8 837 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 MTCH2Q9Y6C9 303 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 EMSYQ7Z589 1322 aa18.15■□□□□ 0.5
CPSF1-205ENST00000531042 LCHNA4D1U4 455 aa18.14■□□□□ 0.49
CPSF1-205ENST00000531042 RBAK-RBAKDNI3L0D1 243 aa18.14■□□□□ 0.49
CPSF1-205ENST00000531042 LGR5O75473 907 aa18.14■□□□□ 0.49
CPSF1-205ENST00000531042 MICU3Q86XE3 530 aa18.14■□□□□ 0.49
CPSF1-205ENST00000531042 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
CPSF1-205ENST00000531042 GPRASP2Q96D09 838 aa18.14■□□□□ 0.49
CPSF1-205ENST00000531042 NEK1Q96PY6 1258 aa18.14■□□□□ 0.49
CPSF1-205ENST00000531042 ASB2Q96Q27 587 aa18.14■□□□□ 0.49
CPSF1-205ENST00000531042 ZBED2Q9BTP6 218 aa18.14■□□□□ 0.49
CPSF1-205ENST00000531042 XIRP2A4UGR9 3374 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 GTPBP6O43824 516 aaPredicted RBP18.13■□□□□ 0.49
CPSF1-205ENST00000531042 ATP9AO75110 1047 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 GJB5O95377 273 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 GNAT1P11488 350 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 MRPS5P82675 430 aaKnown RBP18.13■□□□□ 0.49
CPSF1-205ENST00000531042 EXOSC10Q01780 885 aaKnown RBP18.13■□□□□ 0.49
CPSF1-205ENST00000531042 SP4Q02446 784 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 UBE2SQ16763 222 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 UTP14CQ5TAP6 766 aaKnown RBP18.13■□□□□ 0.49
CPSF1-205ENST00000531042 SYNE3Q6ZMZ3 975 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 SPRED2Q7Z698 418 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 TRIM50Q86XT4 487 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 RAD9AQ99638 391 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 TSPYL2Q9H2G4 693 aaPredicted RBP18.13■□□□□ 0.49
CPSF1-205ENST00000531042 SETD4Q9NVD3 440 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 ZNF215Q9UL58 517 aaPredicted RBP18.13■□□□□ 0.49
CPSF1-205ENST00000531042 TTC28Q96AY4 2481 aa18.13■□□□□ 0.49
CPSF1-205ENST00000531042 CAND2O75155 1236 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 KCNA2P16389 499 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 ITGB5P18084 799 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 ADAM17P78536 824 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 MKRN4PQ13434 485 aaPredicted RBP18.12■□□□□ 0.49
CPSF1-205ENST00000531042 TSGA10IPQ3SY00 556 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 PLEKHG4Q58EX7 1191 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 APOA5Q6Q788 366 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 HEATR3Q7Z4Q2 680 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 DBF4BQ8NFT6 615 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 CDHR1Q96JP9 859 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 PCDHA6Q9UN73 950 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 PCDHA8Q9Y5H6 950 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 UBIAD1Q9Y5Z9 338 aa18.12■□□□□ 0.49
CPSF1-205ENST00000531042 MICAL3Q7RTP6 2002 aa18.11■□□□□ 0.49
CPSF1-205ENST00000531042 PRRC2BQ5JSZ5 2229 aaKnown RBP18.11■□□□□ 0.49
CPSF1-205ENST00000531042 SPDYE3A6NKU9 549 aa18.11■□□□□ 0.49
CPSF1-205ENST00000531042 ADCK5Q3MIX3 580 aa18.11■□□□□ 0.49
CPSF1-205ENST00000531042 KRT40Q6A162 431 aa18.11■□□□□ 0.49
CPSF1-205ENST00000531042 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.11■□□□□ 0.497e-8■■■□□ 18.9
CPSF1-205ENST00000531042 DHX32Q7L7V1 743 aaKnown RBP18.11■□□□□ 0.49
CPSF1-205ENST00000531042 RASEFQ8IZ41 740 aa18.11■□□□□ 0.49
CPSF1-205ENST00000531042 TCEANC2Q96MN5 208 aa18.11■□□□□ 0.49
CPSF1-205ENST00000531042 RBM28Q9NW13 759 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms