RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 TSHZ3Q63HK5 1081 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 C16orf59Q7L2K0 433 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 USP38Q8NB14 1042 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 MYLIPQ8WY64 445 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 OSBP2Q969R2 916 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 SH2D4AQ9H788 454 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 GDPD2Q9HCC8 539 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 ARPP21Q9UBL0 812 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-226ENST00000530720 SLC4A4Q9Y6R1 1079 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 ZNF536O15090 1300 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 SYNGAP1Q96PV0 1343 aa5.42□□□□□ -1.54
CTNND1-226ENST00000530720 GBF1Q92538 1859 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 M0R2C6 588 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 PQBP1O60828 265 aaKnown RBP5.41□□□□□ -1.54
CTNND1-226ENST00000530720 AKR1A1P14550 325 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 CST5P28325 142 aaPredicted RBP5.41□□□□□ -1.54
CTNND1-226ENST00000530720 SOX11P35716 441 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 CDK7P50613 346 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 ACLYP53396 1101 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 NKX3-2P78367 333 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 SEMA3FQ13275 785 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 KCTD2Q14681 263 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 TMEM63BQ5T3F8 832 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 SAMD5Q5TGI4 173 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 ZNF468Q5VIY5 522 aaPredicted RBP5.41□□□□□ -1.54
CTNND1-226ENST00000530720 SNRNP48Q6IEG0 339 aaKnown RBP5.41□□□□□ -1.54
CTNND1-226ENST00000530720 RASGRP2Q7LDG7 609 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 MSL3Q8N5Y2 521 aaKnown RBP5.41□□□□□ -1.54
CTNND1-226ENST00000530720 KBTBD3Q8NAB2 608 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 MAFAQ8NHW3 353 aaPredicted RBP5.41□□□□□ -1.54
CTNND1-226ENST00000530720 MKL1Q969V6 931 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 VWCEQ96DN2 955 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 TRIM11Q96F44 468 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 TOX2Q96NM4 488 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 SLF1Q9BQI6 1058 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 TEX13BQ9BXU2 312 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.41□□□□□ -1.544e-10■□□□□ 8.1
CTNND1-226ENST00000530720 UPF3AQ9H1J1 476 aaKnown RBP5.41□□□□□ -1.54
CTNND1-226ENST00000530720 SLC38A10Q9HBR0 1119 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 ECHDC1Q9NTX5 307 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 SLC5A4Q9NY91 659 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 NYAP2Q9P242 653 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 PRKAG2Q9UGJ0 569 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 DDX19BQ9UMR2 479 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 TACC3Q9Y6A5 838 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 USP3Q9Y6I4 520 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 DDX49Q9Y6V7 483 aaKnown RBP5.41□□□□□ -1.54
CTNND1-226ENST00000530720 XIRP2A4UGR9 3374 aa5.41□□□□□ -1.54
CTNND1-226ENST00000530720 CHD7Q9P2D1 2997 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 TMEM265A0A087WTH1 108 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 GPAA1O43292 621 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 DUSP11O75319 330 aaKnown RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 HMMRO75330 724 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 PRDM1O75626 825 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 TIMP1P01033 207 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 CD4P01730 458 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 COPB2P35606 906 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 ABL2P42684 1182 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 PCBP4P57723 403 aaKnown RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 FPGSQ05932 587 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 LAMC2Q13753 1193 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 KCNA10Q16322 511 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 GIMAP6Q6P9H5 292 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 RNF180Q86T96 592 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 FAM126BQ8IXS8 530 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 STK11IPQ8N1F8 1099 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 LRRC47Q8N1G4 583 aaKnown RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 FAM133AQ8N9E0 248 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 PRPF38AQ8NAV1 312 aaKnown RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 GMCL1P1Q8NEA9 526 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 OTUD7AQ8TE49 926 aaPredicted RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 APPBP2Q92624 585 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 CEP95Q96GE4 821 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 RNPC3Q96LT9 517 aaKnown RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 SEC62Q99442 399 aaKnown RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.4□□□□□ -1.544e-16■□□□□ 10
CTNND1-226ENST00000530720 LRRCC1Q9C099 1032 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 BCL11AQ9H165 835 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 RAVER2Q9HCJ3 691 aaKnown RBP5.4□□□□□ -1.54
CTNND1-226ENST00000530720 STARD7Q9NQZ5 370 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 MTMR4Q9NYA4 1195 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 MARK1Q9P0L2 795 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 PRR12Q9ULL5 1215 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 PCDHGA11Q9Y5H2 935 aa5.4□□□□□ -1.54
CTNND1-226ENST00000530720 GRIN2DO15399 1336 aa5.4□□□□□ -1.55
CTNND1-226ENST00000530720 SALL3Q9BXA9 1300 aa5.4□□□□□ -1.55
CTNND1-226ENST00000530720 GRXCR1A8MXD5 290 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 RNF113AO15541 343 aaKnown RBP5.39□□□□□ -1.55
CTNND1-226ENST00000530720 EFSO43281 561 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 ASGR1P07306 291 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 FOSL2P15408 326 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 CSF2RAP15509 400 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 RAG1P15918 1043 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 ITGB7P26010 798 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 NOVP48745 357 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 OAZ1P54368 228 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 GJA9P57773 515 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 CNTN2Q02246 1040 aa5.39□□□□□ -1.55
CTNND1-226ENST00000530720 ACVR2BQ13705 512 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms