RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 CXXC1Q9P0U4 656 aaPredicted RBP5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ZHX1Q9UKY1 873 aaPredicted RBP5.45□□□□□ -1.54
SSBP3-213ENST00000530618 FAM184BQ9ULE4 1060 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 PCDHA4Q9UN74 947 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 MUC6Q6W4X9 2439 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 PIEZO1Q92508 2521 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 STXBP3O00186 592 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 PIK3CDO00329 1044 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CYTH3O43739 400 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 BAG4O95429 457 aaKnown RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 LARGE1O95461 756 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 MMP1P03956 469 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 MYCNP04198 464 aaPredicted RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CSF2RAP15509 400 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 RAG1P15918 1043 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 GCFC2P16383 781 aaKnown RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 SMPD1P17405 629 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CCND2P30279 289 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 TRAPPC10P48553 1259 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 SNAP25P60880 206 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 BEX3Q00994 111 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 SETQ01105 290 aaPredicted RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 ORC2Q13416 577 aaPredicted RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 NONOQ15233 471 aaKnown RBP eCLIP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 NTRK3Q16288 839 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 RILPL1Q5EBL4 403 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 ARHGEF16Q5VV41 709 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 WWC2Q6AWC2 1192 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 KCNV1Q6PIU1 500 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 NLRX1Q86UT6 975 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 NLRC5Q86WI3 1866 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CMTR1Q8N1G2 835 aaKnown RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 DAGLBQ8NCG7 672 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 FBXO18Q8NFZ0 1043 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 NSUN6Q8TEA1 469 aaKnown RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 GPKOWQ92917 476 aaPredicted RBP eCLIP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CCDC34Q96HJ3 373 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 RNPC3Q96LT9 517 aaKnown RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 GBP4Q96PP9 640 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CTAGE1Q96RT6 745 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 IWS1Q96ST2 819 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 PBX4Q9BYU1 374 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 RAB34Q9BZG1 259 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 PDGFCQ9NRA1 345 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 FAM217BQ9NTX9 383 aaPredicted RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 FOXD4L1Q9NU39 408 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 TMEM39AQ9NV64 488 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CYP39A1Q9NYL5 469 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CHMP5Q9NZZ3 219 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 VPS54Q9P1Q0 977 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 PRKAG2Q9UGJ0 569 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CFAP45Q9UL16 551 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 CNPY2Q9Y2B0 182 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 YBX2Q9Y2T7 364 aaKnown RBP5.44□□□□□ -1.54
SSBP3-213ENST00000530618 STK24Q9Y6E0 443 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 MYO15AQ9UKN7 3530 aa5.44□□□□□ -1.54
SSBP3-213ENST00000530618 LOXHD1Q8IVV2 1947 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 A0A0U1RQG5 324 aaPredicted RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 RBM47A0AV96 593 aaKnown RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 LAD1O00515 517 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 NFIBO00712 420 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 B4GALT4O60513 344 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 JAK2O60674 1132 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 ARHGEF15O94989 841 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 CD2BP2O95400 341 aaKnown RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 C6orf222P0C671 652 aaPredicted RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 ACRP10323 421 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 NCLP19338 710 aaKnown RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 PTMSP20962 102 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 EDNRBP24530 442 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 CYP2C18P33260 490 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 HSD17B4P51659 736 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 PDE4DQ08499 809 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 FUT2Q10981 343 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 GPNMBQ14956 572 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 TMEM266Q2M3C6 531 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 BRDTQ58F21 947 aaPredicted RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 KRT40Q6A162 431 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 CXCL17Q6UXB2 119 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 ZNF365Q70YC5 407 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 FCHSD1Q86WN1 690 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 NOSTRINQ8IVI9 506 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 FBXO16Q8IX29 292 aaPredicted RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 DIS3L2Q8IYB7 885 aaKnown RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 SPRYD3Q8NCJ5 442 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 GIMAP8Q8ND71 665 aaPredicted RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 CLEC4DQ8WXI8 215 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 HERVK_113Q902F9 699 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 RMDN3Q96TC7 470 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 PHF20Q9BVI0 1012 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 NOC4LQ9BVI4 516 aaKnown RBP5.43□□□□□ -1.54
SSBP3-213ENST00000530618 KIAA1671Q9BY89 1806 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 COL4A6Q14031 1691 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 ZNF318Q5VUA4 2279 aa5.43□□□□□ -1.54
SSBP3-213ENST00000530618 WDR81Q562E7 1941 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 USP34Q70CQ2 3546 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.42□□□□□ -1.54
SSBP3-213ENST00000530618 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.42□□□□□ -1.54
SSBP3-213ENST00000530618 hCG_1642624A0A1W2PR95 340 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 GOLGA6L4A6NEF3 574 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms