RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 A6NJR5 290 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 DHX15O43143 795 aaKnown RBP24.18■■□□□ 1.46
CAPN1-220ENST00000530567 NFASCO94856 1347 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 RESTQ13127 1097 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 HSDL1Q3SXM5 330 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 UBE2Q1Q7Z7E8 422 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 FERMT3Q86UX7 667 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 PPTC7Q8NI37 304 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 DIS3LQ8TF46 1054 aaKnown RBP24.18■■□□□ 1.46
CAPN1-220ENST00000530567 NAP1L4Q99733 375 aaKnown RBP24.18■■□□□ 1.46
CAPN1-220ENST00000530567 IPO5O00410 1097 aaKnown RBP24.18■■□□□ 1.46
CAPN1-220ENST00000530567 MYCNP04198 464 aaPredicted RBP24.18■■□□□ 1.46
CAPN1-220ENST00000530567 MMP3P08254 477 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 TRAPPC10P48553 1259 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 PKP1Q13835 747 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 NBR1Q14596 966 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 GNASQ5JWF2 1037 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 POTEDQ86YR6 584 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 GIMAP8Q8ND71 665 aaPredicted RBP24.18■■□□□ 1.46
CAPN1-220ENST00000530567 SLC5A5Q92911 643 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 SPATA33Q96N06 139 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 ZNF577Q9BSK1 485 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 KCNMB3Q9NPA1 279 aa24.18■■□□□ 1.46
CAPN1-220ENST00000530567 HOXD8P13378 290 aaPredicted RBP24.17■■□□□ 1.46
CAPN1-220ENST00000530567 ATP2B1P20020 1258 aa24.17■■□□□ 1.46
CAPN1-220ENST00000530567 KCNA10Q16322 511 aa24.17■■□□□ 1.46
CAPN1-220ENST00000530567 GJA10Q969M2 543 aa24.17■■□□□ 1.46
CAPN1-220ENST00000530567 MLXIPQ9HAP2 919 aa24.17■■□□□ 1.46
CAPN1-220ENST00000530567 ANP32AP39687 249 aaKnown RBP24.16■■□□□ 1.46
CAPN1-220ENST00000530567 CPT1AP50416 773 aa24.16■■□□□ 1.46
CAPN1-220ENST00000530567 TTC38Q5R3I4 469 aa24.16■■□□□ 1.46
CAPN1-220ENST00000530567 HAS1Q92839 578 aa24.16■■□□□ 1.46
CAPN1-220ENST00000530567 TSEN34Q9BSV6 310 aaKnown RBP24.16■■□□□ 1.46
CAPN1-220ENST00000530567 JPH1Q9HDC5 661 aaPredicted RBP24.16■■□□□ 1.46
CAPN1-220ENST00000530567 NOL7Q9UMY1 257 aaKnown RBP24.16■■□□□ 1.46
CAPN1-220ENST00000530567 PHF24Q9UPV7 400 aa24.16■■□□□ 1.46
CAPN1-220ENST00000530567 MKI67P46013 3256 aaKnown RBP24.15■■□□□ 1.46
CAPN1-220ENST00000530567 KBTBD13C9JR72 458 aa24.15■■□□□ 1.46
CAPN1-220ENST00000530567 COL6A1P12109 1028 aa24.15■■□□□ 1.46
CAPN1-220ENST00000530567 BRAPQ7Z569 592 aa24.15■■□□□ 1.46
CAPN1-220ENST00000530567 GPR20Q99678 358 aa24.15■■□□□ 1.46
CAPN1-220ENST00000530567 SDF4Q9BRK5 362 aa24.15■■□□□ 1.46
CAPN1-220ENST00000530567 NEMFO60524 1076 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 CCNE2O96020 404 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 ASGR1P07306 291 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 MCM7P33993 719 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 ACLYP53396 1101 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 SP4Q02446 784 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 RILPL1Q5EBL4 403 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 PCSK9Q8NBP7 692 aaKnown RBP24.14■■□□□ 1.45
CAPN1-220ENST00000530567 RIT2Q99578 217 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 TMEM60Q9H2L4 133 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 TBC1D22BQ9NU19 505 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 SLC9A2Q9UBY0 812 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 RBM19Q9Y4C8 960 aaKnown RBP24.14■■□□□ 1.45
CAPN1-220ENST00000530567 PCDHB6Q9Y5E3 794 aa24.14■■□□□ 1.45
CAPN1-220ENST00000530567 MOXD2PA6NHM9 499 aa24.13■■□□□ 1.45
CAPN1-220ENST00000530567 DDX39AO00148 427 aaKnown RBP24.13■■□□□ 1.45
CAPN1-220ENST00000530567 TBX3O15119 743 aa24.13■■□□□ 1.45
CAPN1-220ENST00000530567 PSMD10O75832 226 aa24.13■■□□□ 1.45
CAPN1-220ENST00000530567 PURAQ00577 322 aaKnown RBP24.13■■□□□ 1.45
CAPN1-220ENST00000530567 ORC2Q13416 577 aaPredicted RBP24.13■■□□□ 1.45
CAPN1-220ENST00000530567 ZNF174Q15697 407 aa24.13■■□□□ 1.45
CAPN1-220ENST00000530567 PAWRQ96IZ0 340 aaKnown RBP24.13■■□□□ 1.45
CAPN1-220ENST00000530567 GSTTP1A0A1W2PQM5 241 aa24.12■■□□□ 1.45
CAPN1-220ENST00000530567 PDIA4P13667 645 aaKnown RBP24.12■■□□□ 1.45
CAPN1-220ENST00000530567 DDIT3P35638 169 aa24.12■■□□□ 1.45
CAPN1-220ENST00000530567 LRCH2Q5VUJ6 765 aa24.12■■□□□ 1.45
CAPN1-220ENST00000530567 B3GNT9Q6UX72 402 aa24.12■■□□□ 1.45
CAPN1-220ENST00000530567 CXCL17Q6UXB2 119 aa24.12■■□□□ 1.45
CAPN1-220ENST00000530567 FAM20AQ96MK3 541 aa24.12■■□□□ 1.45
CAPN1-220ENST00000530567 MTMR9Q96QG7 549 aa24.12■■□□□ 1.45
CAPN1-220ENST00000530567 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.12■■□□□ 1.45
CAPN1-220ENST00000530567 SCN10AQ9Y5Y9 1956 aa24.12■■□□□ 1.45
CAPN1-220ENST00000530567 A0A1W2PQ45 241 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-220ENST00000530567 A0A1W2PQY0 241 aa24.11■■□□□ 1.45
CAPN1-220ENST00000530567 NOP56O00567 594 aaKnown RBP24.11■■□□□ 1.45
CAPN1-220ENST00000530567 ZSCAN22P10073 491 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-220ENST00000530567 ACTR2P61160 394 aa24.11■■□□□ 1.45
CAPN1-220ENST00000530567 CALCRLQ16602 461 aa24.11■■□□□ 1.45
CAPN1-220ENST00000530567 DGKDQ16760 1214 aa24.11■■□□□ 1.45
CAPN1-220ENST00000530567 BRDTQ58F21 947 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-220ENST00000530567 FAM173BQ6P4H8 233 aa24.11■■□□□ 1.45
CAPN1-220ENST00000530567 C4orf32Q8N8J7 132 aa24.11■■□□□ 1.45
CAPN1-220ENST00000530567 VAV3Q9UKW4 847 aa24.11■■□□□ 1.45
CAPN1-220ENST00000530567 ZEB2O60315 1214 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 GAS7O60861 476 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 PPFIA4O75335 1185 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 MYL3P08590 195 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 KAT2BQ92831 832 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 FERMT2Q96AC1 680 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 TEKT3Q9BXF9 490 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 ZSCAN16Q9H4T2 348 aaPredicted RBP24.1■■□□□ 1.45
CAPN1-220ENST00000530567 C11orf49Q9H6J7 331 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 POLR3EQ9NVU0 708 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 ZDHHC9Q9Y397 364 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 ELP1O95163 1332 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 MYH15Q9Y2K3 1946 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 KPNA6O60684 536 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 ATG7O95352 703 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms