RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CMTR1Q8N1G2 835 aaKnown RBP24.05■■□□□ 1.44
SMPD1-204ENST00000530395 PSTPIP2Q9H939 334 aa24.05■■□□□ 1.44
SMPD1-204ENST00000530395 EMSYQ7Z589 1322 aa24.05■■□□□ 1.44
SMPD1-204ENST00000530395 REV3LO60673 3130 aa24.04■■□□□ 1.44
SMPD1-204ENST00000530395 ABHD14A-ACY1A0A1B0GW23 586 aa24.04■■□□□ 1.44
SMPD1-204ENST00000530395 TLL1O43897 1013 aa24.04■■□□□ 1.44
SMPD1-204ENST00000530395 NBNO60934 754 aa24.04■■□□□ 1.44
SMPD1-204ENST00000530395 ZNF618Q5T7W0 954 aa24.04■■□□□ 1.44
SMPD1-204ENST00000530395 SERINC5Q86VE9 423 aa24.04■■□□□ 1.44
SMPD1-204ENST00000530395 GIMAP8Q8ND71 665 aaPredicted RBP24.04■■□□□ 1.44
SMPD1-204ENST00000530395 ATP6V0A1Q93050 837 aa24.04■■□□□ 1.44
SMPD1-204ENST00000530395 LRRC2Q9BYS8 371 aa24.04■■□□□ 1.44
SMPD1-204ENST00000530395 TSPYL2Q9H2G4 693 aaPredicted RBP24.04■■□□□ 1.44
SMPD1-204ENST00000530395 ZNF215Q9UL58 517 aaPredicted RBP24.04■■□□□ 1.44
SMPD1-204ENST00000530395 SMIM10L2AP0DMW4 78 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 SMIM10L2BP0DMW5 78 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 SEMA3FQ13275 785 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 TMTC3Q6ZXV5 915 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 SGMS1Q86VZ5 419 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 MICU3Q86XE3 530 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 RAB11FIP4Q86YS3 637 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 FANCBQ8NB91 859 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 ATXN2LQ8WWM7 1075 aaKnown RBP24.03■■□□□ 1.44
SMPD1-204ENST00000530395 WNT8BQ93098 351 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 CDHR1Q96JP9 859 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 GPR20Q99678 358 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 SENP7Q9BQF6 1050 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 ZBED2Q9BTP6 218 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 BCAS3Q9H6U6 928 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 PRDM6Q9NQX0 595 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 KAT6AQ92794 2004 aa24.03■■□□□ 1.44
SMPD1-204ENST00000530395 GTPBP6O43824 516 aaPredicted RBP24.02■■□□□ 1.44
SMPD1-204ENST00000530395 GNAT1P11488 350 aa24.02■■□□□ 1.44
SMPD1-204ENST00000530395 THPOP40225 353 aa24.02■■□□□ 1.44
SMPD1-204ENST00000530395 COL9A3Q14050 684 aaPredicted RBP24.02■■□□□ 1.44
SMPD1-204ENST00000530395 IKBKEQ14164 716 aa24.02■■□□□ 1.44
SMPD1-204ENST00000530395 HIC1Q14526 733 aa24.02■■□□□ 1.44
SMPD1-204ENST00000530395 TRAF7Q6Q0C0 670 aa24.02■■□□□ 1.44
SMPD1-204ENST00000530395 MICALL1Q8N3F8 863 aa24.02■■□□□ 1.44
SMPD1-204ENST00000530395 CERS4Q9HA82 394 aa24.02■■□□□ 1.44
SMPD1-204ENST00000530395 SPDYE3A6NKU9 549 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 RSPH10B2B2RC85 870 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 LGR5O75473 907 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 RSPH10BP0C881 870 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 HOXC8P31273 242 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 TAP1Q03518 808 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 HEATR3Q7Z4Q2 680 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 CCDC82Q8N4S0 544 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 ARNTL2Q8WYA1 636 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 GPRASP2Q96D09 838 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 NEK1Q96PY6 1258 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 MICAL3Q7RTP6 2002 aa24.01■■□□□ 1.43
SMPD1-204ENST00000530395 hCG_1642624A0A1W2PR95 340 aa24■■□□□ 1.43
SMPD1-204ENST00000530395 DEFB103AP81534 67 aa24■■□□□ 1.43
SMPD1-204ENST00000530395 SP4Q02446 784 aa24■■□□□ 1.43
SMPD1-204ENST00000530395 UTP14CQ5TAP6 766 aaKnown RBP24■■□□□ 1.43
SMPD1-204ENST00000530395 EHMT1Q9H9B1 1298 aa24■■□□□ 1.43
SMPD1-204ENST00000530395 RBM28Q9NW13 759 aaKnown RBP24■■□□□ 1.43
SMPD1-204ENST00000530395 COL4A4P53420 1690 aaPredicted RBP23.99■■□□□ 1.43
SMPD1-204ENST00000530395 XIRP2A4UGR9 3374 aa23.99■■□□□ 1.43
SMPD1-204ENST00000530395 CAND2O75155 1236 aa23.99■■□□□ 1.43
SMPD1-204ENST00000530395 MBTPS1Q14703 1052 aa23.99■■□□□ 1.43
SMPD1-204ENST00000530395 RNPEPQ9H4A4 650 aa23.99■■□□□ 1.43
SMPD1-204ENST00000530395 MUC3AQ02505 3323 aa23.99■■□□□ 1.43
SMPD1-204ENST00000530395 PRRC2BQ5JSZ5 2229 aaKnown RBP23.99■■□□□ 1.43
SMPD1-204ENST00000530395 RFXAPO00287 272 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 TREHO43280 583 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 CDC45O75419 566 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 GJB5O95377 273 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 POU3F3P20264 500 aaPredicted RBP23.98■■□□□ 1.43
SMPD1-204ENST00000530395 MRPS5P82675 430 aaKnown RBP23.98■■□□□ 1.43
SMPD1-204ENST00000530395 KRT32Q14532 448 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 UBE2SQ16763 222 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 APOA5Q6Q788 366 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 SKAP1Q86WV1 359 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 TRIM50Q86XT4 487 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 IL27Q8NEV9 243 aa23.98■■□□□ 1.43
SMPD1-204ENST00000530395 ARHGEF15O94989 841 aa23.97■■□□□ 1.43
SMPD1-204ENST00000530395 MTMR1Q13613 665 aa23.97■■□□□ 1.43
SMPD1-204ENST00000530395 TCTN1Q2MV58 587 aa23.97■■□□□ 1.43
SMPD1-204ENST00000530395 DHX32Q7L7V1 743 aaKnown RBP23.97■■□□□ 1.43
SMPD1-204ENST00000530395 TMCO2Q7Z6W1 182 aaPredicted RBP23.97■■□□□ 1.43
SMPD1-204ENST00000530395 ASB2Q96Q27 587 aa23.97■■□□□ 1.43
SMPD1-204ENST00000530395 RAD9AQ99638 391 aa23.97■■□□□ 1.43
SMPD1-204ENST00000530395 SETD4Q9NVD3 440 aa23.97■■□□□ 1.43
SMPD1-204ENST00000530395 MTCH2Q9Y6C9 303 aa23.97■■□□□ 1.43
SMPD1-204ENST00000530395 CNTNAP5Q8WYK1 1306 aa23.96■■□□□ 1.43
SMPD1-204ENST00000530395 ZBTB43O43298 467 aa23.96■■□□□ 1.43
SMPD1-204ENST00000530395 AMHP03971 560 aa23.96■■□□□ 1.43
SMPD1-204ENST00000530395 SKIV2LQ15477 1246 aaKnown RBP23.96■■□□□ 1.43
SMPD1-204ENST00000530395 RTN1Q16799 776 aa23.96■■□□□ 1.43
SMPD1-204ENST00000530395 DBF4BQ8NFT6 615 aa23.96■■□□□ 1.43
SMPD1-204ENST00000530395 PCDHA6Q9UN73 950 aa23.96■■□□□ 1.43
SMPD1-204ENST00000530395 PCDHA8Q9Y5H6 950 aa23.96■■□□□ 1.43
SMPD1-204ENST00000530395 NRCAMQ92823 1304 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 LCHNA4D1U4 455 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 EPOPA6NHQ4 379 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 MAFGO15525 162 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 KCNA2P16389 499 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 ITGB5P18084 799 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms