RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 KIAA0753Q2KHM9 967 aa19.49■□□□□ 0.71
CCS-205ENST00000530384 LRIT3Q3SXY7 679 aa19.49■□□□□ 0.71
CCS-205ENST00000530384 NOC4LQ9BVI4 516 aaKnown RBP19.49■□□□□ 0.71
CCS-205ENST00000530384 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
CCS-205ENST00000530384 VPS54Q9P1Q0 977 aa19.49■□□□□ 0.71
CCS-205ENST00000530384 NOD1Q9Y239 953 aa19.49■□□□□ 0.71
CCS-205ENST00000530384 KCNA2P16389 499 aa19.48■□□□□ 0.71
CCS-205ENST00000530384 NLRP5P59047 1200 aa19.48■□□□□ 0.71
CCS-205ENST00000530384 ARHGAP4P98171 946 aa19.48■□□□□ 0.71
CCS-205ENST00000530384 CEP55Q53EZ4 464 aa19.48■□□□□ 0.71
CCS-205ENST00000530384 C7orf31Q8N865 590 aa19.48■□□□□ 0.71
CCS-205ENST00000530384 GPR20Q99678 358 aa19.48■□□□□ 0.71
CCS-205ENST00000530384 C16orf70Q9BSU1 422 aa19.48■□□□□ 0.71
CCS-205ENST00000530384 ALG1Q9BT22 464 aa19.48■□□□□ 0.71
CCS-205ENST00000530384 RANBP2P49792 3224 aaKnown RBP19.47■□□□□ 0.71
CCS-205ENST00000530384 ATP9AO75110 1047 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 LGALS2P05162 132 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 CYP3A4P08684 503 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 CYP2C18P33260 490 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 ZNF76P36508 570 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 PTGISQ16647 500 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 PPP1R13LQ8WUF5 828 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 KCNH7Q9NS40 1196 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 GTF2IRD1Q9UHL9 959 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 STK36Q9NRP7 1315 aa19.47■□□□□ 0.71
CCS-205ENST00000530384 H3BRB1 525 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 CYP2C9P11712 490 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 CSF2RAP15509 400 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 SP4Q02446 784 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 SHHQ15465 462 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 C9orf50Q5SZB4 431 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 NIPA1Q7RTP0 329 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 CRYGNQ8WXF5 182 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 TUT1Q9H6E5 874 aaKnown RBP19.46■□□□□ 0.71
CCS-205ENST00000530384 HDAC6Q9UBN7 1215 aa19.46■□□□□ 0.71
CCS-205ENST00000530384 ZNF215Q9UL58 517 aaPredicted RBP19.46■□□□□ 0.71
CCS-205ENST00000530384 MEIS1O00470 390 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 EPHB4P54760 987 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 BFSP2Q13515 415 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 GALNT17Q6IS24 598 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 GDF6Q6KF10 455 aaPredicted RBP19.45■□□□□ 0.7
CCS-205ENST00000530384 CCDC155Q8N6L0 562 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 CYP2W1Q8TAV3 490 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 SDF4Q9BRK5 362 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 C22orf23Q9BZE7 217 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 PKD2L1Q9P0L9 805 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 PCDHA4Q9UN74 947 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 NFASCO94856 1347 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 UMODL1Q5DID0 1318 aa19.45■□□□□ 0.7
CCS-205ENST00000530384 PITPNM1O00562 1244 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 SOX1O00570 391 aaPredicted RBP19.44■□□□□ 0.7
CCS-205ENST00000530384 ADAMTS3O15072 1205 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 XBP1P17861 261 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 ME3Q16798 604 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 RETREG2Q8NC44 543 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 RASGRP4Q8TDF6 673 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 SEPT1Q8WYJ6 367 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 GTF3C6Q969F1 213 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 JPH1Q9HDC5 661 aaPredicted RBP19.44■□□□□ 0.7
CCS-205ENST00000530384 IL23AQ9NPF7 189 aa19.44■□□□□ 0.7
CCS-205ENST00000530384 TRIP12Q14669 1992 aaPredicted RBP19.43■□□□□ 0.7
CCS-205ENST00000530384 KAT6AQ92794 2004 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 ARP10275 920 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 TCF7P36402 384 aaPredicted RBP19.43■□□□□ 0.7
CCS-205ENST00000530384 CCL23P55773 120 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 SETQ01105 290 aaPredicted RBP19.43■□□□□ 0.7
CCS-205ENST00000530384 UTP14CQ5TAP6 766 aaKnown RBP19.43■□□□□ 0.7
CCS-205ENST00000530384 PSRC1Q6PGN9 363 aaPredicted RBP19.43■□□□□ 0.7
CCS-205ENST00000530384 PLA2G4DQ86XP0 818 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 RPUSD2Q8IZ73 545 aaKnown RBP19.43■□□□□ 0.7
CCS-205ENST00000530384 DAGLBQ8NCG7 672 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 CAGE1Q8TC20 777 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 WASF1Q92558 559 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 RNPC3Q96LT9 517 aaKnown RBP19.43■□□□□ 0.7
CCS-205ENST00000530384 WNT8AQ9H1J5 351 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 AGO4Q9HCK5 861 aaKnown RBP19.43■□□□□ 0.7
CCS-205ENST00000530384 SLC9A2Q9UBY0 812 aa19.43■□□□□ 0.7
CCS-205ENST00000530384 FAM86B1E9PN63 330 aa19.42■□□□□ 0.7
CCS-205ENST00000530384 FAM86B2P0C5J1 330 aa19.42■□□□□ 0.7
CCS-205ENST00000530384 GPR153Q6NV75 609 aa19.42■□□□□ 0.7
CCS-205ENST00000530384 BLIDQ8IZY5 108 aa19.42■□□□□ 0.7
CCS-205ENST00000530384 LRCH3Q96II8 777 aa19.42■□□□□ 0.7
CCS-205ENST00000530384 AIFM3Q96NN9 605 aa19.42■□□□□ 0.7
CCS-205ENST00000530384 CTAGE1Q96RT6 745 aa19.42■□□□□ 0.7
CCS-205ENST00000530384 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.42■□□□□ 0.71e-7■■■□□ 18.1
CCS-205ENST00000530384 UPF2Q9HAU5 1272 aaKnown RBP19.42■□□□□ 0.7
CCS-205ENST00000530384 ORC3Q9UBD5 711 aaPredicted RBP19.42■□□□□ 0.7
CCS-205ENST00000530384 TANC1Q9C0D5 1861 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 IGLV3-22A0A075B6J6 115 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 GSTTP1A0A1W2PQM5 241 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 C17orf102A2RUQ5 167 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 LARGE1O95461 756 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 CTDNEP1O95476 244 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 PFKMP08237 780 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 SMIM10L2AP0DMW4 78 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 SMIM10L2BP0DMW5 78 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 CIITAP33076 1130 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 RFC2P35250 354 aa19.41■□□□□ 0.7
CCS-205ENST00000530384 RBM25P49756 843 aaKnown RBP19.41■□□□□ 0.7
CCS-205ENST00000530384 USP11P51784 963 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms