RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 PRPHP41219 470 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 NDUFA8P51970 172 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 TRIM32Q13049 653 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 LY6KQ17RY6 165 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 RESP18Q5W5W9 173 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 ADALQ6DHV7 355 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 RASSF8Q8NHQ8 419 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 MRPS27Q92552 414 aaKnown RBP12.01□□□□□ -0.49
SOX6-213ENST00000530378 COPS5Q92905 334 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 LENG1Q96BZ8 264 aaPredicted RBP12.01□□□□□ -0.49
SOX6-213ENST00000530378 GPRASP2Q96D09 838 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 TEKT3Q9BXF9 490 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 UNC45AQ9H3U1 944 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 WBP1LQ9NX94 342 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 LRWD1Q9UFC0 647 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 VAV3Q9UKW4 847 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 PCDHA12Q9UN75 941 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 C11orf97A0A1B0GVM6 126 aaPredicted RBP12□□□□□ -0.49
SOX6-213ENST00000530378 B4DLN1 442 aa12□□□□□ -0.49
SOX6-213ENST00000530378 EML1O00423 815 aa12□□□□□ -0.49
SOX6-213ENST00000530378 KCNA2P16389 499 aa12□□□□□ -0.49
SOX6-213ENST00000530378 ADCYAP1R1P41586 468 aa12□□□□□ -0.49
SOX6-213ENST00000530378 KARSQ15046 597 aaKnown RBP12□□□□□ -0.49
SOX6-213ENST00000530378 CYFIP1Q7L576 1253 aa12□□□□□ -0.49
SOX6-213ENST00000530378 NIPA1Q7RTP0 329 aa12□□□□□ -0.49
SOX6-213ENST00000530378 SLFN12Q8IYM2 578 aa12□□□□□ -0.49
SOX6-213ENST00000530378 TRIB2Q92519 343 aa12□□□□□ -0.49
SOX6-213ENST00000530378 ERO1AQ96HE7 468 aa12□□□□□ -0.49
SOX6-213ENST00000530378 A0A087WWV3 80 aa12□□□□□ -0.49
SOX6-213ENST00000530378 A0A087X0B3 334 aa12□□□□□ -0.49
SOX6-213ENST00000530378 PSMD10O75832 226 aa12□□□□□ -0.49
SOX6-213ENST00000530378 HOXC6P09630 235 aa12□□□□□ -0.49
SOX6-213ENST00000530378 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
SOX6-213ENST00000530378 CYP4A11Q02928 519 aa12□□□□□ -0.49
SOX6-213ENST00000530378 SPIRE1Q08AE8 756 aa12□□□□□ -0.49
SOX6-213ENST00000530378 CCDC73Q6ZRK6 1079 aa12□□□□□ -0.49
SOX6-213ENST00000530378 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
SOX6-213ENST00000530378 MORC4Q8TE76 937 aa12□□□□□ -0.49
SOX6-213ENST00000530378 SNX29Q8TEQ0 813 aa12□□□□□ -0.49
SOX6-213ENST00000530378 FAM20AQ96MK3 541 aa12□□□□□ -0.49
SOX6-213ENST00000530378 KATNBL1Q9H079 304 aa12□□□□□ -0.49
SOX6-213ENST00000530378 SRRDQ9UH36 339 aa12□□□□□ -0.49
SOX6-213ENST00000530378 TCEAL9Q9UHQ7 104 aa12□□□□□ -0.49
SOX6-213ENST00000530378 SPATA31C2B4DYI2 1134 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 TBX3O15119 743 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 FOXN1O15353 648 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 DHX15O43143 795 aaKnown RBP11.99□□□□□ -0.49
SOX6-213ENST00000530378 ADCY6O43306 1168 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 NR1I2O75469 434 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 STAM2O75886 525 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 GGPS1O95749 300 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 CCNE2O96020 404 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 LONP1P36776 959 aaKnown RBP11.99□□□□□ -0.49
SOX6-213ENST00000530378 MAMDC4Q6UXC1 1216 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 TRMT1LQ7Z2T5 733 aaKnown RBP11.99□□□□□ -0.49
SOX6-213ENST00000530378 IGSF22Q8N9C0 903 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 SDF4Q9BRK5 362 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 DIS3Q9Y2L1 958 aaKnown RBP11.99□□□□□ -0.49
SOX6-213ENST00000530378 SAMM50Q9Y512 469 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 TRIM17Q9Y577 477 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 MYH9P35579 1960 aaKnown RBP11.99□□□□□ -0.49
SOX6-213ENST00000530378 SYNGAP1Q96PV0 1343 aa11.99□□□□□ -0.49
SOX6-213ENST00000530378 A0A1W2PQ27 194 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 A0A1W2PQ64 194 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 A0A1W2PQD8 194 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 TXNP10599 105 aaKnown RBP11.98□□□□□ -0.49
SOX6-213ENST00000530378 CMA1P23946 247 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 UBA7P41226 1012 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 MLLT1Q03111 559 aaPredicted RBP11.98□□□□□ -0.49
SOX6-213ENST00000530378 ACVR2BQ13705 512 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 CCDC144BQ3MJ40 725 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 TAPT1Q6NXT6 567 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 CABP7Q86V35 215 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 BANK1Q8NDB2 785 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 RAET1EQ8TD07 263 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 SCFD2Q8WU76 684 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 DHX58Q96C10 678 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 MMTAG2Q9BU76 263 aaKnown RBP11.98□□□□□ -0.49
SOX6-213ENST00000530378 JPH1Q9HDC5 661 aaPredicted RBP11.98□□□□□ -0.49
SOX6-213ENST00000530378 VTA1Q9NP79 307 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 DACT1Q9NYF0 836 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 FAM13BQ9NYF5 915 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 KCNH3Q9ULD8 1083 aa11.98□□□□□ -0.49
SOX6-213ENST00000530378 POTEB3A0JP26 581 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 POLR2DO15514 142 aaKnown RBP11.97□□□□□ -0.49
SOX6-213ENST00000530378 TRAK2O60296 914 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 CCT6AP40227 531 aaKnown RBP11.97□□□□□ -0.49
SOX6-213ENST00000530378 CTCFP49711 727 aaPredicted RBP11.97□□□□□ -0.49
SOX6-213ENST00000530378 TTLL4Q14679 1199 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 ECM1Q16610 540 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 OLFML2BQ68BL8 750 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 CAVIN1Q6NZI2 390 aaKnown RBP11.97□□□□□ -0.49
SOX6-213ENST00000530378 POTEBQ6S5H4 581 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 MIER3Q7Z3K6 550 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
SOX6-213ENST00000530378 LRRC15Q8TF66 581 aa11.97□□□□□ -0.49
SOX6-213ENST00000530378 CDHR1Q96JP9 859 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms