RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 TOPORSQ9NS56 1045 aaPredicted RBP8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 TOMM22Q9NS69 142 aa8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 ZBTB21Q9ULJ3 1066 aa8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 PLAGL2Q9UPG8 496 aa8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 NOC2LQ9Y3T9 749 aaKnown RBP8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 PCDHGA9Q9Y5G4 932 aaKnown RBP8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 PCDHGA8Q9Y5G5 932 aa8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 PCDHGA7Q9Y5G6 932 aa8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 PCDHGA6Q9Y5G7 932 aa8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 PCDHGA3Q9Y5H0 932 aa8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 PCDHGA2Q9Y5H1 932 aa8.3□□□□□ -1.08
CAPRIN1-208ENST00000530008 TRIM75PA6NK02 468 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 KCNK3O14649 394 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 LTFP02788 710 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 RPL10P27635 214 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 CYP2C19P33261 490 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 SPIRE1Q08AE8 756 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 BRD3Q15059 726 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 HABP4Q5JVS0 413 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 GPR158Q5T848 1215 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 ANGEL2Q5VTE6 544 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 RNF43Q68DV7 783 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 FSTL4Q6MZW2 842 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 WAPLQ7Z5K2 1190 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 PTRH1Q86Y79 214 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 Q8N1Y9 231 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 ZNF610Q8N9Z0 462 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 CLIP3Q96DZ5 547 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 FCRL2Q96LA5 508 aaPredicted RBP8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 PRDM11Q9NQV5 511 aa8.29□□□□□ -1.08
CAPRIN1-208ENST00000530008 TCRBV5S4A2TA0A5A2 114 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 GOLGA8AA7E2F4 631 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 GOLGA8BA8MQT2 603 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 H2AFYO75367 372 aaKnown RBP8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 COL6A2P12110 1019 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 LPOP22079 712 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 FPR2P25090 351 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 CEBPAP49715 358 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 PURAQ00577 322 aaKnown RBP8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 EGR3Q06889 387 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 GTF2H3Q13889 308 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 HLA-DQA1Q5Y7H0 255 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 EPM2AIP1Q7L775 607 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 OTOP3Q7RTS5 596 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 SVIPQ8NHG7 77 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 USP33Q8TEY7 942 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 LMBR1Q8WVP7 490 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 HSPBAP1Q96EW2 488 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 TRMT2BQ96GJ1 504 aaKnown RBP8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 ZDHHC5Q9C0B5 715 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 MS4A5Q9H3V2 200 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 PCIF1Q9H4Z3 704 aa8.28□□□□□ -1.08
CAPRIN1-208ENST00000530008 MAN2B1O00754 1011 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 NKRFO15226 690 aaKnown RBP eCLIP8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 XPOTO43592 962 aaKnown RBP8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 ESR1P03372 595 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 VCAM1P19320 739 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 GPR3P46089 330 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 KIF11P52732 1056 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 NOSTRINQ8IVI9 506 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 TEX2Q8IWB9 1127 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 TIFAQ96CG3 184 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 NUP88Q99567 741 aaPredicted RBP8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 METTL22Q9BUU2 404 aaPredicted RBP8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 EPB41L1Q9H4G0 881 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 MARCH2Q9P0N8 246 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 GULP1Q9UBP9 304 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 ZNF281Q9Y2X9 895 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 X6R8D5 127 aa8.27□□□□□ -1.09
CAPRIN1-208ENST00000530008 KLHL33A6NCF5 533 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 WIPF1O43516 503 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 PPP1R11O60927 126 aaPredicted RBP8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 HIP1RO75146 1068 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 IL33O95760 270 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 LDHAP00338 332 aaKnown RBP8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 TRIM27P14373 513 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 RBM10P98175 930 aaKnown RBP8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 EFCAB2Q5VUJ9 269 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 FBXO41Q8TF61 875 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 TP53INP1Q96A56 240 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 AIFM3Q96NN9 605 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 ZMAT4Q9H898 229 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 LRRC4CQ9HCJ2 640 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 ATP13A1Q9HD20 1204 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 ANLNQ9NQW6 1124 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 RCAN3Q9UKA8 241 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 PITPNM2Q9BZ72 1349 aa8.26□□□□□ -1.09
CAPRIN1-208ENST00000530008 C22orf46C9J442 243 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 KDM1AO60341 852 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 EIF5BO60841 1220 aaKnown RBP8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 DGKIO75912 1065 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 CHRNA4P43681 627 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 HTRA3P83110 453 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 GBX1Q14549 363 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 PDCD1Q15116 288 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 CLUL1Q15846 466 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 FIGNQ5HY92 759 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms