RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CD4P01730 458 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 CLTBP09497 229 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 ARP10275 920 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 KCNA2P16389 499 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 ZNF76P36508 570 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 NBPF20Q3BBV1 942 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 NIPA1Q7RTP0 329 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 SH3RF1Q7Z6J0 888 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 CCDC83Q8IWF9 413 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 FAM126BQ8IXS8 530 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 KAT2BQ92831 832 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 TRIM43Q96BQ3 446 aaPredicted RBP14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 ALG1Q9BT22 464 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 KCNH7Q9NS40 1196 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 PRKAG2Q9UGJ0 569 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 KCNJ14Q9UNX9 436 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 DOCK5Q9H7D0 1870 aa14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 KIAA0355O15063 1070 aa14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 TLR3O15455 904 aaKnown RBP14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 CIITAP33076 1130 aa14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 NFRKBQ6P4R8 1299 aa14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 GPR20Q99678 358 aa14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 LLPHQ9BRT6 129 aaKnown RBP14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 AGO4Q9HCK5 861 aaKnown RBP14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 PRDM5Q9NQX1 630 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 GJB4Q9NTQ9 266 aa14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 TMEM39AQ9NV64 488 aa14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 TELO2Q9Y4R8 837 aa14.44□□□□□ -0.1
CCDC90B-216ENST00000529856 IGLV3-22A0A075B6J6 115 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 FAM86B1E9PN63 330 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 HAS3O00219 553 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 EDIL3O43854 480 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 F2P00734 622 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 FAM86B2P0C5J1 330 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 MAGEA10P43363 369 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 USP11P51784 963 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 PTPN11Q06124 597 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 GDF15Q99988 308 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 TRPV6Q9H1D0 765 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 PRO3102Q9H379 93 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 PKD2L1Q9P0L9 805 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 PCDH10Q9P2E7 1040 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 TBX21Q9UL17 535 aa14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 COLQQ9Y215 455 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-216ENST00000529856 NFASCO94856 1347 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 B4GALT4O60513 344 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 ZNF286BP0CG31 522 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 BMP8BP34820 402 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 PSEN2P49810 448 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 CHMP4BP1P59074 171 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 PLA2G4DQ86XP0 818 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 TBCKQ8TEA7 893 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 PPP1R13LQ8WUF5 828 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 LBHD1Q9BQE6 289 aaPredicted RBP14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 KATNAL1Q9BW62 490 aa14.42□□□□□ -0.1
CCDC90B-216ENST00000529856 GSTTP1A0A1W2PQM5 241 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 CD2BP2O95400 341 aaKnown RBP14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 LGALS2P05162 132 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 ITGB8P26012 769 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 MCM2P49736 904 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 MDM2Q00987 491 aaPredicted RBP14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 SP4Q02446 784 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 ITGB3BPQ13352 177 aaPredicted RBP14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 MFSD10Q14728 455 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 NONOQ15233 471 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 KIAA0753Q2KHM9 967 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 PRR16Q569H4 304 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 FAM47CQ5HY64 1035 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 KRT25Q7Z3Z0 450 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 SESTD1Q86VW0 696 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 OXER1Q8TDS5 423 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 SEPT1Q8WYJ6 367 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 BADQ92934 168 aa14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 JPH1Q9HDC5 661 aaPredicted RBP14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 TRMT13Q9NUP7 481 aaKnown RBP14.41□□□□□ -0.1
CCDC90B-216ENST00000529856 H3BRB1 525 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 TIMP1P01033 207 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 SUPT20HL2P0C7V6 817 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 RAG1P15918 1043 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 TCF7P36402 384 aaPredicted RBP14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 HMGN5P82970 282 aaKnown RBP14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 SETQ01105 290 aaPredicted RBP14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 LENG9Q96B70 501 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 TMX3Q96JJ7 454 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 SDF4Q9BRK5 362 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 TUT1Q9H6E5 874 aaKnown RBP14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 HDAC6Q9UBN7 1215 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 SLC9A2Q9UBY0 812 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 LTBP2Q14767 1821 aa14.4□□□□□ -0.1
CCDC90B-216ENST00000529856 CYP3A7-CYP3A51PA0A087WV96 503 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 CCDC194A0A1B0GVG4 234 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 IPO5O00410 1097 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 DHX15O43143 795 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 MMP1P03956 469 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 CYP3A7P24462 503 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 KRT2P35908 639 aa14.39□□□□□ -0.11
CCDC90B-216ENST00000529856 TRIM29Q14134 588 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms