RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 FBXO22Q8NEZ5 403 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 DBF4BQ8NFT6 615 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 SEPT8Q92599 483 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 GPKOWQ92917 476 aaPredicted RBP eCLIP14.01□□□□□ -0.17
USH1C-208ENST00000529563 USP26Q9BXU7 913 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 LMCD1Q9NZU5 365 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 INSL6Q9Y581 213 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 TCF20Q9UGU0 1960 aaKnown RBP14.01□□□□□ -0.17
USH1C-208ENST00000529563 LINC01553A4QN01 128 aa14□□□□□ -0.17
USH1C-208ENST00000529563 FIBPO43427 364 aa14□□□□□ -0.17
USH1C-208ENST00000529563 UPP2O95045 317 aa14□□□□□ -0.17
USH1C-208ENST00000529563 HOXD8P13378 290 aaPredicted RBP14□□□□□ -0.17
USH1C-208ENST00000529563 CHMLP26374 656 aa14□□□□□ -0.17
USH1C-208ENST00000529563 ERVK-21P61565 698 aa14□□□□□ -0.17
USH1C-208ENST00000529563 GPNMBQ14956 572 aa14□□□□□ -0.17
USH1C-208ENST00000529563 TRIM71Q2Q1W2 868 aaKnown RBP14□□□□□ -0.17
USH1C-208ENST00000529563 NLRX1Q86UT6 975 aa14□□□□□ -0.17
USH1C-208ENST00000529563 SERINC5Q86VE9 423 aa14□□□□□ -0.17
USH1C-208ENST00000529563 WNT8BQ93098 351 aa14□□□□□ -0.17
USH1C-208ENST00000529563 YME1L1Q96TA2 773 aa14□□□□□ -0.17
USH1C-208ENST00000529563 C16orf70Q9BSU1 422 aa14□□□□□ -0.17
USH1C-208ENST00000529563 SENP2Q9HC62 589 aa14□□□□□ -0.17
USH1C-208ENST00000529563 BDP1A6H8Y1 2624 aa14□□□□□ -0.17
USH1C-208ENST00000529563 CCDC69A6NI79 296 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 TREHO43280 583 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 ARHGAP4P98171 946 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 PTPROQ16827 1216 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 TCTN1Q2MV58 587 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 BMP2KLQ5H9B9 411 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 METTL7BQ6UX53 244 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.99□□□□□ -0.17
USH1C-208ENST00000529563 MYL10Q9BUA6 226 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 SUGCTQ9HAC7 445 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 NCOR1O75376 2440 aa13.99□□□□□ -0.17
USH1C-208ENST00000529563 TRANK1O15050 2925 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 CYTH3O43739 400 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 LPXNO60711 386 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 DDAH1O94760 285 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 GNAQP50148 359 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 TROAPQ12815 778 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 MBTPS1Q14703 1052 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 EP400NLQ6ZTU2 488 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 SKAP1Q86WV1 359 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 ZNF654Q8IZM8 581 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 GIMAP8Q8ND71 665 aaPredicted RBP13.98□□□□□ -0.17
USH1C-208ENST00000529563 LZTS2Q9BRK4 669 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 RNPEPQ9H4A4 650 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 SETD4Q9NVD3 440 aa13.98□□□□□ -0.17
USH1C-208ENST00000529563 COL4A4P53420 1690 aaPredicted RBP13.98□□□□□ -0.17
USH1C-208ENST00000529563 BAZ2BQ9UIF8 2168 aaKnown RBP13.98□□□□□ -0.17
USH1C-208ENST00000529563 SPATA31C2B4DYI2 1134 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 CAND2O75155 1236 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 ICAM3P32942 547 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 MRPS9P82933 396 aaKnown RBP13.97□□□□□ -0.17
USH1C-208ENST00000529563 HIC1Q14526 733 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 SLC35G1Q2M3R5 365 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 PLEKHG4Q58EX7 1191 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 XRRA1Q6P2D8 792 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 TRAF7Q6Q0C0 670 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 USP17L6PQ6QN14 398 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 RSPH3Q86UC2 560 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 APBB2Q92870 758 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 SAMD11Q96NU1 681 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 INPP4AQ96PE3 977 aaPredicted RBP13.97□□□□□ -0.17
USH1C-208ENST00000529563 GPR20Q99678 358 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 C17orf80Q9BSJ5 609 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 RAPGEFL1Q9UHV5 662 aa13.97□□□□□ -0.17
USH1C-208ENST00000529563 RBM8AQ9Y5S9 174 aaKnown RBP13.97□□□□□ -0.17
USH1C-208ENST00000529563 PTPRSQ13332 1948 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 SGSM2O43147 1006 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 PRC1O43663 620 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 CDC45O75419 566 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 KCNA5P22460 613 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 MCM5P33992 734 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 PCNX4Q63HM2 1172 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 TRIM50Q86XT4 487 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 TMTC2Q8N394 836 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 GLG1Q92896 1179 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 FAM122AQ96E09 287 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 CDHR1Q96JP9 859 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 SPZ1Q9BXG8 430 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
USH1C-208ENST00000529563 BCAS3Q9H6U6 928 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 UBE2ZQ9H832 354 aaPredicted RBP13.96□□□□□ -0.17
USH1C-208ENST00000529563 PSTPIP2Q9H939 334 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 EHMT1Q9H9B1 1298 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 PKD2L1Q9P0L9 805 aa13.96□□□□□ -0.17
USH1C-208ENST00000529563 SPDYE3A6NKU9 549 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 SSTR3P32745 418 aaPredicted RBP13.95□□□□□ -0.18
USH1C-208ENST00000529563 ANTXR2P58335 489 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 EPC2Q52LR7 807 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 TIGD5Q53EQ6 642 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 SYNE3Q6ZMZ3 975 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 MB21D2Q8IYB1 491 aaPredicted RBP13.95□□□□□ -0.18
USH1C-208ENST00000529563 IGDCC4Q8TDY8 1250 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 MAP3K14Q99558 947 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 SENP7Q9BQF6 1050 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 LY9Q9HBG7 655 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 HCN4Q9Y3Q4 1203 aa13.95□□□□□ -0.18
USH1C-208ENST00000529563 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms