RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 MAFGO15525 162 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 MARCH6O60337 910 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 ADAMTS4O75173 837 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 SGPL1O95470 568 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 PDIA4P13667 645 aaKnown RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 GJA8P48165 433 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 SOX10P56693 466 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 GJA9P57773 515 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 BEX3Q00994 111 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 CALCRLQ16602 461 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 FSCN1Q16658 493 aaKnown RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 RILPL1Q5EBL4 403 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 GNASQ5JWF2 1037 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 MYSM1Q5VVJ2 828 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 FAM173BQ6P4H8 233 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 METTL7BQ6UX53 244 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 RNF180Q86T96 592 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 GIMAP8Q8ND71 665 aaPredicted RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 ETNPPLQ8TBG4 499 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 AFG1LQ8WV93 481 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 CRISPLD2Q9H0B8 497 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 UPF3AQ9H1J1 476 aaKnown RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 ZSCAN16Q9H4T2 348 aaPredicted RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 JPH1Q9HDC5 661 aaPredicted RBP12.92□□□□□ -0.34
CHD7-209ENST00000529472 OGDHLQ9ULD0 1010 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 Q9Y3F1 56 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 PCDHB6Q9Y5E3 794 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
CHD7-209ENST00000529472 GAS7O60861 476 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 F13A1P00488 732 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 CPT1AP50416 773 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 LRRC41Q15345 812 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 HSDL1Q3SXM5 330 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 LRCH2Q5VUJ6 765 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 SLC5A5Q92911 643 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 EMID1Q96A84 441 aaPredicted RBP12.91□□□□□ -0.34
CHD7-209ENST00000529472 TMEM60Q9H2L4 133 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
CHD7-209ENST00000529472 NFASCO94856 1347 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 KBTBD13C9JR72 458 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 CTAGE5O15320 804 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 CHMP2AO43633 222 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 BAG4O95429 457 aaKnown RBP12.9□□□□□ -0.34
CHD7-209ENST00000529472 BRD1O95696 1058 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 MMP3P08254 477 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 EN2P19622 333 aaPredicted RBP12.9□□□□□ -0.34
CHD7-209ENST00000529472 DDIT3P35638 169 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 BRDTQ58F21 947 aaPredicted RBP12.9□□□□□ -0.34
CHD7-209ENST00000529472 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 PPTC7Q8NI37 304 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 IPO9Q96P70 1041 aaKnown RBP12.9□□□□□ -0.34
CHD7-209ENST00000529472 TEKT3Q9BXF9 490 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 FTOQ9C0B1 505 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHD7-209ENST00000529472 KCNMB3Q9NPA1 279 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 SLC9A2Q9UBY0 812 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 ZDHHC9Q9Y397 364 aa12.9□□□□□ -0.34
CHD7-209ENST00000529472 A6NJR5 290 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 DNM1LO00429 736 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 DHX15O43143 795 aaKnown RBP12.89□□□□□ -0.35
CHD7-209ENST00000529472 CCNE2O96020 404 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 MYL3P08590 195 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 OR52Z1P0C646 297 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
CHD7-209ENST00000529472 PTGDRQ13258 359 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
CHD7-209ENST00000529472 KCNA10Q16322 511 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 SLFN12Q8IYM2 578 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 KLHDC9Q8NEP7 349 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 HAS1Q92839 578 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 RIT2Q99578 217 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 GPR20Q99678 358 aa12.89□□□□□ -0.35
CHD7-209ENST00000529472 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
CHD7-209ENST00000529472 ELP1O95163 1332 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 TBX3O15119 743 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 ZEB2O60315 1214 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 PSMD10O75832 226 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 ASGR1P07306 291 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 ZNF286BP0CG31 522 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
CHD7-209ENST00000529472 TCF7P36402 384 aaPredicted RBP12.88□□□□□ -0.35
CHD7-209ENST00000529472 TXKP42681 527 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 ACLYP53396 1101 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 ACTR2P61160 394 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 NKX3-2P78367 333 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 KRT76Q01546 638 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 SF3A1Q15459 793 aaKnown RBP12.88□□□□□ -0.35
CHD7-209ENST00000529472 DGKDQ16760 1214 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
CHD7-209ENST00000529472 DIS3LQ8TF46 1054 aaKnown RBP12.88□□□□□ -0.35
CHD7-209ENST00000529472 FERMT2Q96AC1 680 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 MTMR9Q96QG7 549 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 UNC45AQ9H3U1 944 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 VAV3Q9UKW4 847 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms