RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 GAS7O60861 476 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 KCNA2P16389 499 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 SP4Q02446 784 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 LAMC2Q13753 1193 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 CELF3Q5SZQ8 465 aaKnown RBP15.73■□□□□ 0.11
BEST1-206ENST00000529265 LRCH2Q5VUJ6 765 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 SLFN12Q8IYM2 578 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 GJA10Q969M2 543 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 FAM20AQ96MK3 541 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 XPNPEP3Q9NQH7 507 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.73■□□□□ 0.11
BEST1-206ENST00000529265 TBC1D22BQ9NU19 505 aa15.73■□□□□ 0.11
BEST1-206ENST00000529265 NFASCO94856 1347 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 NOP56O00567 594 aaKnown RBP15.72■□□□□ 0.11
BEST1-206ENST00000529265 TBX3O15119 743 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 OR52Z1P0C646 297 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 C6orf222P0C671 652 aaPredicted RBP15.72■□□□□ 0.11
BEST1-206ENST00000529265 PTGS1P23219 599 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 TXKP42681 527 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 PTGDRQ13258 359 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 ITGB3BPQ13352 177 aaPredicted RBP15.72■□□□□ 0.11
BEST1-206ENST00000529265 SF3A1Q15459 793 aaKnown RBP15.72■□□□□ 0.11
BEST1-206ENST00000529265 BRDTQ58F21 947 aaPredicted RBP15.72■□□□□ 0.11
BEST1-206ENST00000529265 METTL7BQ6UX53 244 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 ETNPPLQ8TBG4 499 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 SPATA33Q96N06 139 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 TEKT3Q9BXF9 490 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 TMEM60Q9H2L4 133 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 JPH1Q9HDC5 661 aaPredicted RBP15.72■□□□□ 0.11
BEST1-206ENST00000529265 PAK6Q9NQU5 681 aaPredicted RBP15.72■□□□□ 0.11
BEST1-206ENST00000529265 Q9Y3F1 56 aa15.72■□□□□ 0.11
BEST1-206ENST00000529265 FARP2O94887 1054 aaPredicted RBP15.71■□□□□ 0.11
BEST1-206ENST00000529265 BMP15O95972 392 aa15.71■□□□□ 0.11
BEST1-206ENST00000529265 PGK1P00558 417 aa15.71■□□□□ 0.11
BEST1-206ENST00000529265 TFRCP02786 760 aaKnown RBP15.71■□□□□ 0.11
BEST1-206ENST00000529265 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.11
BEST1-206ENST00000529265 SLC5A5Q92911 643 aa15.71■□□□□ 0.11
BEST1-206ENST00000529265 RIT2Q99578 217 aa15.71■□□□□ 0.11
BEST1-206ENST00000529265 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
BEST1-206ENST00000529265 KCNMB3Q9NPA1 279 aa15.71■□□□□ 0.11
BEST1-206ENST00000529265 TFIP11Q9UBB9 837 aaKnown RBP15.71■□□□□ 0.11
BEST1-206ENST00000529265 SLC9A2Q9UBY0 812 aa15.71■□□□□ 0.11
BEST1-206ENST00000529265 CLIC4Q9Y696 253 aa15.71■□□□□ 0.11
BEST1-206ENST00000529265 MYH9P35579 1960 aaKnown RBP15.71■□□□□ 0.11
BEST1-206ENST00000529265 SYNRGQ9UMZ2 1314 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 LAD1O00515 517 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 CHMP2AO43633 222 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 GJB1P08034 283 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 DNM1Q05193 864 aaKnown RBP15.7■□□□□ 0.1
BEST1-206ENST00000529265 ARHGAP1Q07960 439 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 LHX8Q68G74 356 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 RNF180Q86T96 592 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 AFG1LQ8WV93 481 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 HAS1Q92839 578 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 USP28Q96RU2 1077 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 FTOQ9C0B1 505 aaKnown RBP eCLIP15.7■□□□□ 0.1
BEST1-206ENST00000529265 CFAP45Q9UL16 551 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 PCDHA12Q9UN75 941 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 SAMM50Q9Y512 469 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 WDR81Q562E7 1941 aa15.7■□□□□ 0.1
BEST1-206ENST00000529265 DHX15O43143 795 aaKnown RBP15.69■□□□□ 0.1
BEST1-206ENST00000529265 ZEB2O60315 1214 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 SGPL1O95470 568 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 CPT1AP50416 773 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 GJA9P57773 515 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 BEX3Q00994 111 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 KRT76Q01546 638 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 STK38Q15208 465 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 FSCN1Q16658 493 aaKnown RBP15.69■□□□□ 0.1
BEST1-206ENST00000529265 TMEM266Q2M3C6 531 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 GNASQ5JWF2 1037 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 ATL3Q6DD88 541 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 ARRDC4Q8NCT1 418 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 U2AF1L4Q8WU68 220 aaKnown RBP15.69■□□□□ 0.1
BEST1-206ENST00000529265 EMID1Q96A84 441 aaPredicted RBP15.69■□□□□ 0.1
BEST1-206ENST00000529265 MTMR9Q96QG7 549 aa15.69■□□□□ 0.1
BEST1-206ENST00000529265 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
BEST1-206ENST00000529265 PSMD10O75832 226 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 TECP42680 631 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 KRT85P78386 507 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 ATP2C1P98194 919 aaPredicted RBP15.68■□□□□ 0.1
BEST1-206ENST00000529265 HSDL1Q3SXM5 330 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 DTHD1Q6ZMT9 781 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 TNS4Q8IZW8 715 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 PPTC7Q8NI37 304 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 SEPT1Q8WYJ6 367 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 UPF3AQ9H1J1 476 aaKnown RBP15.68■□□□□ 0.1
BEST1-206ENST00000529265 POLR3EQ9NVU0 708 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 ELP1O95163 1332 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 KAT6AQ92794 2004 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 MYADML2A6NDP7 307 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 ADAMTS4O75173 837 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 MMP3P08254 477 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 ACTR2P61160 394 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 IRX5P78411 483 aaPredicted RBP15.68■□□□□ 0.1
BEST1-206ENST00000529265 LRRC41Q15345 812 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 DGKDQ16760 1214 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 NCAPH2Q6IBW4 605 aa15.68■□□□□ 0.1
BEST1-206ENST00000529265 ZNF746Q6NUN9 644 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms