RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 DEF6Q9H4E7 631 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 FAM204AQ9H8W3 233 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 PSTPIP2Q9H939 334 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 GDF3Q9NR23 364 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 FEZ2Q9UHY8 353 aaPredicted RBP9.25□□□□□ -0.93
CSTF3-208ENST00000528865 DMGDHQ9UI17 866 aaKnown RBP9.25□□□□□ -0.93
CSTF3-208ENST00000528865 PCDHA12Q9UN75 941 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 ATP6V0A2Q9Y487 856 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 STK24Q9Y6E0 443 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 FOCADQ5VW36 1801 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 TAF1LQ8IZX4 1826 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 ATP8B3O60423 1300 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 THSD7AQ9UPZ6 1657 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 A6NNZ2 444 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 TRAF5O00463 557 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 TBX3O15119 743 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 ONECUT3O60422 494 aaPredicted RBP9.24□□□□□ -0.93
CSTF3-208ENST00000528865 PPFIA4O75335 1185 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 CYP11B2P19099 503 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 ANXA13P27216 316 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 TNNT3P45378 269 aaPredicted RBP9.24□□□□□ -0.93
CSTF3-208ENST00000528865 TNNI2P48788 182 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 SLC12A3P55017 1021 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 RASSF7Q02833 373 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 GFPT1Q06210 699 aaPredicted RBP9.24□□□□□ -0.93
CSTF3-208ENST00000528865 UBE2SQ16763 222 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 TUBB8Q3ZCM7 444 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 CFAP221Q4G0U5 840 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 EMC10Q5UCC4 262 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 NFRKBQ6P4R8 1299 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 CACNA2D4Q7Z3S7 1137 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 FRMD5Q7Z6J6 570 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 SRLQ86TD4 932 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 SLFN12Q8IYM2 578 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 C1orf131Q8NDD1 294 aaKnown RBP9.24□□□□□ -0.93
CSTF3-208ENST00000528865 GLIS3Q8NEA6 775 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 HDAC7Q8WUI4 952 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 DCAF4Q8WV16 495 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 SCFD1Q8WVM8 642 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 CRACR2AQ9BSW2 395 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 LSM14BQ9BX40 385 aaKnown RBP9.24□□□□□ -0.93
CSTF3-208ENST00000528865 GANQ9H2C0 597 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 LUC7LQ9NQ29 371 aaKnown RBP9.24□□□□□ -0.93
CSTF3-208ENST00000528865 PLCB1Q9NQ66 1216 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 DDX4Q9NQI0 724 aaKnown RBP9.24□□□□□ -0.93
CSTF3-208ENST00000528865 EMILIN3Q9NT22 766 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 SERPINB13Q9UIV8 391 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 TRAF3IP3Q9Y228 551 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 PCDHGC5Q9Y5F6 944 aa9.24□□□□□ -0.93
CSTF3-208ENST00000528865 GREB1LQ9C091 1923 aaPredicted RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 BHMG1C9JSJ3 638 aaPredicted RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 GOLGA8KD6RF30 607 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 E9PMD0 336 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 OPA1O60313 960 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 TOM1O60784 492 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 NPM3O75607 178 aaKnown RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 ZMYND10O75800 440 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 MYBP10242 640 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 SLC1A4P43007 532 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 EPHB4P54760 987 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 GTF2IP78347 998 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 SKOR1P84550 965 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 AP3B2Q13367 1082 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 EZH2Q15910 746 aaKnown RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 SLC18A3Q16572 532 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 Q4G0T1 1027 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 CCDC40Q4G0X9 1142 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 ARSHQ5FYA8 562 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 MEI1Q5TIA1 1274 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 CDC42EP5Q6NZY7 148 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 SND1Q7KZF4 910 aaKnown RBP eCLIP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 EPM2AIP1Q7L775 607 aaPredicted RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 TEX2Q8IWB9 1127 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 CD302Q8IX05 232 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 MREGQ8N565 214 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 CERS5Q8N5B7 392 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 EIF1ADQ8N9N8 165 aaKnown RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 MXD3Q9BW11 206 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 DHX36Q9H2U1 1008 aaKnown RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 LRRC4BQ9NT99 713 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 USP40Q9NVE5 1235 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 TMEM51Q9NW97 253 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 NYAP2Q9P242 653 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 STIM2Q9P246 746 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 FBXL5Q9UKA1 691 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 NENFQ9UMX5 172 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 KIAA1024Q9UPX6 916 aa9.23□□□□□ -0.93
CSTF3-208ENST00000528865 BZW2Q9Y6E2 419 aaKnown RBP9.23□□□□□ -0.93
CSTF3-208ENST00000528865 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 QSER1Q2KHR3 1735 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 A0A0U1RQG5 324 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 GOLGA6BA6NDN3 693 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 C6orf229H3BNL8 230 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 MYO1CO00159 1063 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 CETN3O15182 167 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 NCK2O43639 380 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 MARCH6O60337 910 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 PHACTR2O75167 634 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms