RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 OTOP1Q7RTM1 612 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 PLA2G4DQ86XP0 818 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 TMEM87AQ8NBN3 555 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 LINC00301Q8NCQ3 95 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 NPLOC4Q8TAT6 608 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 CD99L2Q8TCZ2 262 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 SLC5A5Q92911 643 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 LENG9Q96B70 501 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 SDF4Q9BRK5 362 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 KATNBL1Q9H079 304 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 TMEM260Q9NX78 707 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 DDX25Q9UHL0 483 aaKnown RBP7.03□□□□□ -1.28
MACF1-228ENST00000528611 FAM184BQ9ULE4 1060 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 PCDHA12Q9UN75 941 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 PPME1Q9Y570 386 aa7.03□□□□□ -1.28
MACF1-228ENST00000528611 SRPRBQ9Y5M8 271 aaKnown RBP7.03□□□□□ -1.28
MACF1-228ENST00000528611 ASTN1O14525 1302 aa7.02□□□□□ -1.28
MACF1-228ENST00000528611 MYH7BA7E2Y1 1941 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 DOCK3Q8IZD9 2030 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 SPTLC2O15270 562 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 EDIL3O43854 480 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PPFIA3O75145 1194 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PPFIA4O75335 1185 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PSMD10O75832 226 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 RGS20O76081 388 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 ATG7O95352 703 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PGK2P07205 417 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 ZNF865P0CJ78 1059 aaPredicted RBP7.02□□□□□ -1.29
MACF1-228ENST00000528611 HSPA1AP0DMV8 641 aaKnown RBP7.02□□□□□ -1.29
MACF1-228ENST00000528611 HSPA1BP0DMV9 641 aaKnown RBP7.02□□□□□ -1.29
MACF1-228ENST00000528611 HOXD8P13378 290 aaPredicted RBP7.02□□□□□ -1.29
MACF1-228ENST00000528611 CYBAP13498 195 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 CYP2B6P20813 491 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PSEN1P49768 467 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 JAK3P52333 1124 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PTGDRQ13258 359 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 SEMA3FQ13275 785 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PPP2R5CQ13362 524 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PTPAQ15257 358 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 SF3A1Q15459 793 aaKnown RBP7.02□□□□□ -1.29
MACF1-228ENST00000528611 CALCRLQ16602 461 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 PRR16Q569H4 304 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 HAUS3Q68CZ6 603 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 TAPT1Q6NXT6 567 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 B3GNT9Q6UX72 402 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 EXOC8Q8IYI6 725 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 C4orf32Q8N8J7 132 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 IGSF22Q8N9C0 903 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 SPRYD3Q8NCJ5 442 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 ETNPPLQ8TBG4 499 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 RASGRP4Q8TDF6 673 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 RNF166Q96A37 237 aaPredicted RBP7.02□□□□□ -1.29
MACF1-228ENST00000528611 CCDC34Q96HJ3 373 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 ZNF577Q9BSK1 485 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 TEKT3Q9BXF9 490 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 NT5C3AQ9H0P0 336 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 SPC25Q9HBM1 224 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 AGO4Q9HCK5 861 aaKnown RBP7.02□□□□□ -1.29
MACF1-228ENST00000528611 DDX41Q9UJV9 622 aaKnown RBP7.02□□□□□ -1.29
MACF1-228ENST00000528611 TRIM17Q9Y577 477 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 MRVI1Q9Y6F6 885 aa7.02□□□□□ -1.29
MACF1-228ENST00000528611 KIAA1217Q5T5P2 1943 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 FAM237AA0A1B0GTK4 181 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 A0A1W2PQ27 194 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 A0A1W2PQ64 194 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 A0A1W2PQD8 194 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 A6NJR5 290 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 FOXN1O15353 648 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 MSH4O15457 936 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 ZEB2O60315 1214 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 MARCH6O60337 910 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 CUTAO60888 179 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 CABYRO75952 493 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 LYPLA2O95372 231 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 GH1P01241 217 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 RPLP2P05387 115 aaKnown RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 TXNP10599 105 aaKnown RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 MYCLP12524 364 aaPredicted RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 KCNA2P16389 499 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 CST5P28325 142 aaPredicted RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 CPT1AP50416 773 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 PKP1Q13835 747 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 STK38Q15208 465 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 EARS2Q5JPH6 523 aaKnown RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 CELF3Q5SZQ8 465 aaKnown RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 LRCH2Q5VUJ6 765 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 FERMT3Q86UX7 667 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 ELOA2Q8IYF1 753 aaPredicted RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 ZNF710Q8N1W2 664 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 KRI1Q8N9T8 703 aaKnown RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 ERMNQ8TAM6 284 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 AFAP1L1Q8TED9 768 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 SEPT1Q8WYJ6 367 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 TRIB2Q92519 343 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 ARMC5Q96C12 935 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 SPATA32Q96LK8 384 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 USP28Q96RU2 1077 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 TSEN34Q9BSV6 310 aaKnown RBP7.01□□□□□ -1.29
MACF1-228ENST00000528611 ARHGAP39Q9C0H5 1083 aa7.01□□□□□ -1.29
MACF1-228ENST00000528611 CCSER1Q9C0I3 900 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms