RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 OGFOD1Q8N543 542 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 OR2W6PQ8NHA6 318 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 NOX5Q96PH1 765 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 DPH5Q9H2P9 285 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 THRAP3Q9Y2W1 955 aaKnown RBP19.57■□□□□ 0.72
LTBP3-210ENST00000528516 CDC25CP30307 473 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 DAAM2Q86T65 1068 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 SH3RF3Q8TEJ3 882 aaPredicted RBP19.57■□□□□ 0.72
LTBP3-210ENST00000528516 HVCN1Q96D96 273 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 MINPP1Q9UNW1 487 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 TBC1D5Q92609 795 aa19.56■□□□□ 0.72
LTBP3-210ENST00000528516 LRRC27Q9C0I9 530 aa19.56■□□□□ 0.72
LTBP3-210ENST00000528516 PSTPIP2Q9H939 334 aa19.56■□□□□ 0.72
LTBP3-210ENST00000528516 LGALS16A8MUM7 142 aa19.56■□□□□ 0.72
LTBP3-210ENST00000528516 HMGB1P1B2RPK0 211 aaPredicted RBP19.56■□□□□ 0.72
LTBP3-210ENST00000528516 CCDC169A6NNP5 214 aa19.56■□□□□ 0.72
LTBP3-210ENST00000528516 CLIC2O15247 247 aa19.56■□□□□ 0.72
LTBP3-210ENST00000528516 CCNHP51946 323 aaPredicted RBP19.56■□□□□ 0.72
LTBP3-210ENST00000528516 HAUS3Q68CZ6 603 aa19.56■□□□□ 0.72
LTBP3-210ENST00000528516 TBC1D1Q86TI0 1168 aaPredicted RBP19.56■□□□□ 0.72
LTBP3-210ENST00000528516 CREG2Q8IUH2 290 aa19.56■□□□□ 0.72
LTBP3-210ENST00000528516 PPP2R5BQ15173 497 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 CCDC63Q8NA47 563 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 TMEM260Q9NX78 707 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 ZNF233A6NK53 670 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 GRIPAP1Q4V328 841 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 NSMCE1Q8WV22 266 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 YIPF3Q9GZM5 350 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 CAPN11Q9UMQ6 739 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 BCS1LQ9Y276 419 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 ANKS4BQ8N8V4 417 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 DBNDD1Q9H9R9 158 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 PCDHA1Q9Y5I3 950 aa19.55■□□□□ 0.72
LTBP3-210ENST00000528516 CACNA1FO60840 1977 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 GDF11O95390 407 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 PLEKP08567 350 aaPredicted RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 MYCLP12524 364 aaPredicted RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 PLCB4Q15147 1175 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 ASIC2Q16515 512 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 FBXL16Q8N461 479 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 U2AF1L4Q8WU68 220 aaKnown RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 TBC1D22AQ8WUA7 517 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 FAXDC2Q96IV6 333 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 PCDHA13Q9Y5I0 950 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 RASSF9O75901 435 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 SFMBT2Q5VUG0 894 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 MYOCDQ8IZQ8 938 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 NOVA2Q9UNW9 492 aaKnown RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 PHF20L1A8MW92 1017 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 EPB41P11171 864 aaKnown RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 NKX1-1Q15270 411 aaPredicted RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 KRT71Q3SY84 523 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 YTHDF3Q7Z739 585 aaKnown RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 SRBD1Q8N5C6 995 aaKnown RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 SEC16BQ96JE7 1060 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 CALR3Q96L12 384 aaKnown RBP19.54■□□□□ 0.72
LTBP3-210ENST00000528516 KCNK9Q9NPC2 374 aa19.54■□□□□ 0.72
LTBP3-210ENST00000528516 GLI1P08151 1106 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 SCTRP47872 440 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 DRP2Q13474 957 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 NTRK3Q16288 839 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 ZNF658Q5TYW1 1059 aaPredicted RBP19.53■□□□□ 0.72
LTBP3-210ENST00000528516 CCDC170Q8IYT3 715 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 SAAL1Q96ER3 474 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 NUP58Q9BVL2 599 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 DCP1AQ9NPI6 582 aaPredicted RBP19.53■□□□□ 0.72
LTBP3-210ENST00000528516 CRYBG1Q9Y4K1 1723 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 ZBED6P86452 979 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 FAM133BQ5BKY9 247 aaKnown RBP19.53■□□□□ 0.72
LTBP3-210ENST00000528516 FAM26FQ5R3K3 315 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 WDR59Q6PJI9 974 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 CEP120Q8N960 986 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 ZBTB10Q96DT7 871 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 ATP8A2Q9NTI2 1148 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 ADAMTS1Q9UHI8 967 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 DNM3Q9UQ16 869 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 ADAM9Q13443 819 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 TAB3Q8N5C8 712 aaPredicted RBP19.53■□□□□ 0.72
LTBP3-210ENST00000528516 PROCA1Q8NCQ7 364 aaPredicted RBP19.53■□□□□ 0.72
LTBP3-210ENST00000528516 STAMBPL1Q96FJ0 436 aa19.53■□□□□ 0.72
LTBP3-210ENST00000528516 COL5A2P05997 1499 aaPredicted RBP19.52■□□□□ 0.72
LTBP3-210ENST00000528516 KIF3CO14782 793 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 EXOC3O60645 756 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 FCER1AP12319 257 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 KLRK1P26718 216 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 EIF4A3P38919 411 aaKnown RBP19.52■□□□□ 0.72
LTBP3-210ENST00000528516 ACCSLQ4AC99 568 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 NSMFQ6X4W1 530 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 TMTC3Q6ZXV5 915 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 CCDC84Q86UT8 332 aaPredicted RBP19.52■□□□□ 0.72
LTBP3-210ENST00000528516 NOD2Q9HC29 1040 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 PCDHA4Q9UN74 947 aa19.52■□□□□ 0.72
LTBP3-210ENST00000528516 MARF1Q9Y4F3 1742 aaKnown RBP19.52■□□□□ 0.72
LTBP3-210ENST00000528516 RUFY4Q6ZNE9 571 aa19.52■□□□□ 0.71
LTBP3-210ENST00000528516 CCDC127Q96BQ5 260 aa19.52■□□□□ 0.71
LTBP3-210ENST00000528516 DNAJC7Q99615 494 aa19.52■□□□□ 0.71
LTBP3-210ENST00000528516 ATP6V0A4Q9HBG4 840 aa19.52■□□□□ 0.71
LTBP3-210ENST00000528516 PANK4Q9NVE7 773 aa19.52■□□□□ 0.71
LTBP3-210ENST00000528516 PRPF3O43395 683 aaKnown RBP19.51■□□□□ 0.71
LTBP3-210ENST00000528516 KRT5P13647 590 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms