RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	DEFB123	Q8N688	67 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	C7orf31	Q8N865	590 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	DHX38	Q92620	1227 aa	Known RBP	13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	SCLY	Q96I15	445 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	CDHR1	Q96JP9	859 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	SLC26A6	Q9BXS9	759 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	RNF26	Q9BY78	433 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	GLT8D2	Q9H1C3	349 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	EHMT1	Q9H9B1	1298 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	NOD1	Q9Y239	953 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	MYH6	P13533	1939 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	COL6A3	P12111	3177 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	PITPNM1	O00562	1244 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	SREBF1	P36956	1147 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	ANAPC15	P60006	121 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	SMAD3	P84022	425 aa	Known RBP	13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	AKAP17A	Q02040	695 aa	Known RBP	13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	SP4	Q02446	784 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	HIC1	Q14526	733 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	CYP2W1	Q8TAV3	490 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	IL17RA	Q96F46	866 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	ZNF274	Q96GC6	653 aa	Predicted RBP	13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	MXRA8	Q9BRK3	442 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362	ZMYND12	Q9H0C1	365 aa		13.45	□□□□□ -0.26
PSMC3-205	ENST00000528362		H3BRB1	525 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	SEC24B	O95487	1268 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	ARHGAP4	P98171	946 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	ZNF200	P98182	395 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	STK3	Q13188	491 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	BFSP2	Q13515	415 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	JAKMIP3	Q5VZ66	844 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	HERVK_113	Q902F9	699 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	WNT8B	Q93098	351 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	TUT1	Q9H6E5	874 aa	Known RBP	13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	PKD2L1	Q9P0L9	805 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	VPS54	Q9P1Q0	977 aa		13.44	□□□□□ -0.26
PSMC3-205	ENST00000528362	FGB	P02675	491 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	HOXC8	P31273	242 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	RBL2	Q08999	1139 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	TRIM71	Q2Q1W2	868 aa	Known RBP	13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	CEP55	Q53EZ4	464 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	UTP14C	Q5TAP6	766 aa	Known RBP	13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	REXO1	Q8N1G1	1221 aa	Known RBP	13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	RETREG2	Q8NC44	543 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	CAGE1	Q8TC20	777 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	RASGRP4	Q8TDF6	673 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	CRYGN	Q8WXF5	182 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	C6orf50	Q9HD87	102 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	KCNH7	Q9NS40	1196 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	MTMR10	Q9NXD2	777 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	TPCN1	Q9ULQ1	816 aa		13.43	□□□□□ -0.26
PSMC3-205	ENST00000528362	MEIS1	O00470	390 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	CPLX1	O14810	134 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	MAFG	O15525	162 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	PFKM	P08237	780 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	IQCF3	P0C7M6	154 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	SMIM10L2A	P0DMW4	78 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	SMIM10L2B	P0DMW5	78 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	AR	P10275	920 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	TCF7	P36402	384 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	PTK7	Q13308	1070 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	GPNMB	Q14956	572 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	TRAF7	Q6Q0C0	670 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	OTOP2	Q7RTS6	562 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	DEFB128	Q7Z7B8	93 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	TRIM22	Q8IYM9	498 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	RPUSD2	Q8IZ73	545 aa	Known RBP	13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	CCDC155	Q8N6L0	562 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	CCDC148	Q8NFR7	591 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	AFAP1L1	Q8TED9	768 aa		13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	ZNF215	Q9UL58	517 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMC3-205	ENST00000528362	KIAA1217	Q5T5P2	1943 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	GSTTP1	A0A1W2PQM5	241 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	C17orf102	A2RUQ5	167 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	FAM86B1	E9PN63	330 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	CYP3A4	P08684	503 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	FAM86B2	P0C5J1	330 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	CKB	P12277	381 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	SELP	P16109	830 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	GNA11	P29992	359 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	RFC2	P35250	354 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	AK2	P54819	239 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	SSRP1	Q08945	709 aa	Known RBP	13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	SCRN1	Q12765	414 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	ITGB3BP	Q13352	177 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	MCTP2	Q6DN12	878 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	LRRC8D	Q7L1W4	858 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	NIPA1	Q7RTP0	329 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	SERINC5	Q86VE9	423 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	SEPT1	Q8WYJ6	367 aa		13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	AGO4	Q9HCK5	861 aa	Known RBP	13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	JPH1	Q9HDC5	661 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMC3-205	ENST00000528362	SH3GLB2	Q9NR46	395 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms