RNA–Protein interactions for RNA: ENST00000528319.1

AP003400.1-201, humanhuman

TSL 5 BASIC

Gene AP003400.1, Length 231 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003400.1-201ENST00000528319 HOXC6P09630 235 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 PCP11498 1178 aaKnown RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 CYBAP13498 195 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 ATP1A3P13637 1013 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 RAG1P15918 1043 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 HMGCS2P54868 508 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 HERVK_113P62684 666 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 ERVK-9P63128 1117 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 ERVK-24P63145 666 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 TPM4P67936 248 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 MYL5Q02045 173 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 SPP2Q13103 211 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 TBX2Q13207 712 aaPredicted RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 NR5A1Q13285 461 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 GNL2Q13823 731 aaKnown RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 MORC3Q14149 939 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 DHX8Q14562 1220 aaKnown RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 SAFBQ15424 915 aaKnown RBP eCLIP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 ZRSR1Q15695 479 aaKnown RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 RAB30Q15771 203 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 RILPL1Q5EBL4 403 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 C6orf132Q5T0Z8 1188 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 CEP135Q66GS9 1140 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 ISM2Q6H9L7 571 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 CTR9Q6PD62 1173 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 SH3BP5LQ7L8J4 393 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 VSTM4Q8IW00 320 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 TRIM22Q8IYM9 498 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 CMTR1Q8N1G2 835 aaKnown RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 ENAHQ8N8S7 591 aaPredicted RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 TRPV1Q8NER1 839 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 SPATA20Q8TB22 786 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 GTF3C2Q8WUA4 911 aaPredicted RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 ESR2Q92731 530 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 MED15Q96RN5 788 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 ZSCAN10Q96SZ4 725 aaPredicted RBP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 PHF20Q9BVI0 1012 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 IDI2Q9BXS1 227 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 PORCNQ9H237 461 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 TMX1Q9H3N1 280 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 TOMM22Q9NS69 142 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 AATFQ9NY61 560 aaKnown RBP eCLIP5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 RAI14Q9P0K7 980 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 RBPJLQ9UBG7 517 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 SERTAD1Q9UHV2 236 aa5.49□□□□□ -1.53
AP003400.1-201ENST00000528319 CNTNAP5Q8WYK1 1306 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 ATG2AQ2TAZ0 1938 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 A0A087X0B3 334 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 ERICH2A1L162 156 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 MINDY4BA8MYZ0 360 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TMEM232C9JQI7 657 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 KIF2AO00139 706 aaPredicted RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 WNT7AO00755 349 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 CBFA2T2O43439 604 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 PEX10O60683 326 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 DDAH1O94760 285 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 PLEKHA8P1O95397 391 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TIMP1P01033 207 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 ZNF18P17022 549 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 CNGA1P29973 690 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 ADCYAP1R1P41586 468 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 IRX3P78415 501 aaPredicted RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TROAPQ12815 778 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 NAA30Q147X3 362 aaPredicted RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 POSTNQ15063 836 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 LRRC41Q15345 812 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 PTPN14Q15678 1187 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 Q3C1V9 767 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 GLIPR1L2Q4G1C9 344 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 SBK1Q52WX2 424 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 CAVIN4Q5BKX8 364 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 EARS2Q5JPH6 523 aaKnown RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 SPECC1Q5M775 1068 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TMEM240Q5SV17 173 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 CCDC174Q6PII3 467 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TMED8Q6PL24 325 aaPredicted RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TMTC3Q6ZXV5 915 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 USP49Q70CQ1 688 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 C16orf59Q7L2K0 433 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 ANKRD33Q7Z3H0 272 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 CCDC84Q86UT8 332 aaPredicted RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TMEM139Q8IV31 216 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TRIML1Q8N9V2 468 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TTC13Q8NBP0 860 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 RETREG2Q8NC44 543 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 BANK1Q8NDB2 785 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 CNNM3Q8NE01 707 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 CCDC112Q8NEF3 446 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 ENOX1Q8TC92 643 aaKnown RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 NUP133Q8WUM0 1156 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 NSUN4Q96CB9 384 aaKnown RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 PPP1R13BQ96KQ4 1090 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TOX2Q96NM4 488 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 NOL10Q9BSC4 688 aaKnown RBP5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 UBAC1Q9BSL1 405 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 TRAIPQ9BWF2 469 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 CD320Q9NPF0 282 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 USP40Q9NVE5 1235 aa5.48□□□□□ -1.53
AP003400.1-201ENST00000528319 RBM28Q9NW13 759 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms