RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PPTC7Q8NI37 304 aa12.24□□□□□ -0.45
CPSF1-203ENST00000527916 SEPT8Q92599 483 aa12.24□□□□□ -0.45
CPSF1-203ENST00000527916 TOP1MTQ969P6 601 aa12.24□□□□□ -0.45
CPSF1-203ENST00000527916 EMID1Q96A84 441 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-203ENST00000527916 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
CPSF1-203ENST00000527916 IWS1Q96ST2 819 aa12.24□□□□□ -0.45
CPSF1-203ENST00000527916 PHOX2BQ99453 314 aa12.24□□□□□ -0.45
CPSF1-203ENST00000527916 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-203ENST00000527916 CACNA1AO00555 2505 aa12.24□□□□□ -0.45
CPSF1-203ENST00000527916 STXBP3O00186 592 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 SGSM2O43147 1006 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 UPP2O95045 317 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 LTBRP36941 435 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-203ENST00000527916 SMAD4Q13485 552 aaKnown RBP12.23□□□□□ -0.45
CPSF1-203ENST00000527916 CTC1Q2NKJ3 1217 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 PRSS33Q8NF86 280 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 UBAC1Q9BSL1 405 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 C11orf84Q9BUA3 381 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-203ENST00000527916 LMAN2LQ9H0V9 348 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 IRF2BPLQ9H1B7 796 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 RWDD3Q9Y3V2 267 aa12.23□□□□□ -0.45
CPSF1-203ENST00000527916 KIAA1217Q5T5P2 1943 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 TMEM221A6NGB7 291 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 M0R296 226 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 HAS3O00219 553 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 MBTPS2O43462 519 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 PPFIA4O75335 1185 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 RB1P06400 928 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 CYP21A2P08686 494 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 ZNF286BP0CG31 522 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 GOLGA8HP0CJ92 632 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 CTNNB1P35222 781 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 TRDNQ13061 729 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 SEC23AQ15436 765 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 CLUL1Q15846 466 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 USH1GQ495M9 461 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 MAP4K1Q92918 833 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 WNT8BQ93098 351 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 RMDN3Q96TC7 470 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 IFIH1Q9BYX4 1025 aaKnown RBP12.22□□□□□ -0.45
CPSF1-203ENST00000527916 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
CPSF1-203ENST00000527916 MRVI1Q9Y6F6 885 aa12.22□□□□□ -0.45
CPSF1-203ENST00000527916 NLRC5Q86WI3 1866 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 ABCB11O95342 1321 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 GFRA3O60609 400 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 EIF3JO75822 258 aaKnown RBP12.21□□□□□ -0.45
CPSF1-203ENST00000527916 PARP1P09874 1014 aaKnown RBP12.21□□□□□ -0.45
CPSF1-203ENST00000527916 ZNF200P98182 395 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-203ENST00000527916 PTH1RQ03431 593 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 IFIT1BQ5T764 474 aaKnown RBP12.21□□□□□ -0.45
CPSF1-203ENST00000527916 IER5LQ5T953 404 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 ARHGEF16Q5VV41 709 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 MCF2L2Q86YR7 1114 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 FIBCD1Q8N539 461 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 APBB2Q92870 758 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 PPP2R3CQ969Q6 453 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 IL17RAQ96F46 866 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 TAAR1Q96RJ0 339 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 CD207Q9UJ71 328 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 COL4A6Q14031 1691 aa12.21□□□□□ -0.45
CPSF1-203ENST00000527916 MYH7BA7E2Y1 1941 aa12.21□□□□□ -0.46
CPSF1-203ENST00000527916 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.46
CPSF1-203ENST00000527916 FAM186AA6NE01 2351 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 WDR87Q6ZQQ6 2873 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 CAND2O75155 1236 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 HYAL1Q12794 435 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 CDC37Q16543 378 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-203ENST00000527916 KCNV1Q6PIU1 500 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 CYB5R4Q7L1T6 521 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 FBXL6Q8N531 539 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 NCOA7Q8NI08 942 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-203ENST00000527916 ATP6V0A1Q93050 837 aa12.2□□□□□ -0.46
CPSF1-203ENST00000527916 VPS13AQ96RL7 3174 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 C17orf102A2RUQ5 167 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 PALM3A6NDB9 673 aaPredicted RBP12.19□□□□□ -0.46
CPSF1-203ENST00000527916 HOXD8P13378 290 aaPredicted RBP12.19□□□□□ -0.46
CPSF1-203ENST00000527916 BMPR1AP36894 532 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 DLX2Q07687 328 aaPredicted RBP12.19□□□□□ -0.46
CPSF1-203ENST00000527916 TCF15Q12870 199 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 SAMD3Q8N6K7 520 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 MTMR8Q96EF0 704 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 SPATA33Q96N06 139 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 MTA3Q9BTC8 594 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 CPVLQ9H3G5 476 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 IGFLR1Q9H665 355 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 JMJD4Q9H9V9 463 aa12.19□□□□□ -0.46
CPSF1-203ENST00000527916 MAP3K20Q9NYL2 800 aaKnown RBP12.19□□□□□ -0.46
CPSF1-203ENST00000527916 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
CPSF1-203ENST00000527916 ERICH2A1L162 156 aa12.18□□□□□ -0.46
CPSF1-203ENST00000527916 KLRF2D3W0D1 207 aa12.18□□□□□ -0.46
CPSF1-203ENST00000527916 E7EWF7 191 aa12.18□□□□□ -0.46
CPSF1-203ENST00000527916 GRM6O15303 877 aa12.18□□□□□ -0.46
CPSF1-203ENST00000527916 TBX10O75333 385 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms