RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 PTPN11Q06124 597 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-209ENST00000527469 SEMA3FQ13275 785 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 TRIM29Q14134 588 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 MFSD10Q14728 455 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 RABEP1Q15276 862 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 BLIDQ8IZY5 108 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 RASGRP4Q8TDF6 673 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 PPP1R12CQ9BZL4 782 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 HIPK3Q9H422 1215 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 KCNH7Q9NS40 1196 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 TRMT13Q9NUP7 481 aaKnown RBP15.24■□□□□ 0.03
CAPN1-209ENST00000527469 PCDH10Q9P2E7 1040 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 TBX21Q9UL17 535 aa15.24■□□□□ 0.03
CAPN1-209ENST00000527469 ZNF215Q9UL58 517 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-209ENST00000527469 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 B4GALT4O60513 344 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 F2P00734 622 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 CD4P01730 458 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 KCNA2P16389 499 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 KIAA0753Q2KHM9 967 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 UTP14CQ5TAP6 766 aaKnown RBP15.23■□□□□ 0.03
CAPN1-209ENST00000527469 PLA2G4DQ86XP0 818 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 TMEM199Q8N511 208 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 PPP1R13LQ8WUF5 828 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 ZSCAN31Q96LW9 406 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-209ENST00000527469 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
CAPN1-209ENST00000527469 JPH1Q9HDC5 661 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-209ENST00000527469 H3BRB1 525 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 ATP9AO75110 1047 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 LARGE1O95461 756 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 LGALS2P05162 132 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 HOXD8P13378 290 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-209ENST00000527469 SETQ01105 290 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-209ENST00000527469 PTGISQ16647 500 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 NIPA1Q7RTP0 329 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 TDHQ8IZJ6 230 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 CCDC155Q8N6L0 562 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 CYP2W1Q8TAV3 490 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 KAT2BQ92831 832 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 GPR20Q99678 358 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 TUT1Q9H6E5 874 aaKnown RBP15.22■□□□□ 0.03
CAPN1-209ENST00000527469 BCAS3Q9H6U6 928 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 KCNJ14Q9UNX9 436 aa15.22■□□□□ 0.03
CAPN1-209ENST00000527469 CCDC194A0A1B0GVG4 234 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 MEIS1O00470 390 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 CYP3A4P08684 503 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 ARP10275 920 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 CYP2C9P11712 490 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 TCF7P36402 384 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-209ENST00000527469 PPIGQ13427 754 aaKnown RBP eCLIP15.21■□□□□ 0.032e-6■■■□□ 17.2
CAPN1-209ENST00000527469 PRR16Q569H4 304 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 MFSD5Q6N075 450 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 KRT25Q7Z3Z0 450 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 CCDC83Q8IWF9 413 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 DAGLBQ8NCG7 672 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 IL27Q8NEV9 243 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 GLG1Q92896 1179 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 AZI2Q9H6S1 392 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 AGO4Q9HCK5 861 aaKnown RBP15.21■□□□□ 0.03
CAPN1-209ENST00000527469 SH2B1Q9NRF2 756 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-209ENST00000527469 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 SCN10AQ9Y5Y9 1956 aa15.21■□□□□ 0.03
CAPN1-209ENST00000527469 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.03
CAPN1-209ENST00000527469 FAM86B1E9PN63 330 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 DTNBO60941 627 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 FAM86B2P0C5J1 330 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 ITGB8P26012 769 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 CYP2C18P33260 490 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 USP11P51784 963 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 BFSP2Q13515 415 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 NONOQ15233 471 aaKnown RBP eCLIP15.2■□□□□ 0.02
CAPN1-209ENST00000527469 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
CAPN1-209ENST00000527469 TBCKQ8TEA7 893 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 KIF2CQ99661 725 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 NOC4LQ9BVI4 516 aaKnown RBP15.2■□□□□ 0.02
CAPN1-209ENST00000527469 PRO3102Q9H379 93 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 HDAC6Q9UBN7 1215 aa15.2■□□□□ 0.02
CAPN1-209ENST00000527469 NFASCO94856 1347 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 C17orf102A2RUQ5 167 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 DDX39AO00148 427 aaKnown RBP15.19■□□□□ 0.02
CAPN1-209ENST00000527469 IPO5O00410 1097 aaKnown RBP15.19■□□□□ 0.02
CAPN1-209ENST00000527469 ADAMTS3O15072 1205 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 JAK2O60674 1132 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 GNAT1P11488 350 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 FOSBP53539 338 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 CCL23P55773 120 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 SESTD1Q86VW0 696 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 TRIM50Q86XT4 487 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 FAM184AQ8NB25 1140 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 LLPHQ9BRT6 129 aaKnown RBP15.19■□□□□ 0.02
CAPN1-209ENST00000527469 C16orf70Q9BSU1 422 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 PHF20Q9BVI0 1012 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 TBC1D22BQ9NU19 505 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 GTF2IRD1Q9UHL9 959 aa15.19■□□□□ 0.02
CAPN1-209ENST00000527469 LTBP2Q14767 1821 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms