RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 GTF2IRD1Q9UHL9 959 aa25.72■■□□□ 1.71
LMNB2-204ENST00000527409 TANC1Q9C0D5 1861 aa25.72■■□□□ 1.71
LMNB2-204ENST00000527409 KCNA2P16389 499 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 SSRP1Q08945 709 aaKnown RBP25.71■■□□□ 1.71
LMNB2-204ENST00000527409 STK3Q13188 491 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 PTGISQ16647 500 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 PSRC1Q6PGN9 363 aaPredicted RBP25.71■■□□□ 1.71
LMNB2-204ENST00000527409 REXO1Q8N1G1 1221 aaKnown RBP25.71■■□□□ 1.71
LMNB2-204ENST00000527409 BICD2Q8TD16 824 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 RNPC3Q96LT9 517 aaKnown RBP25.71■■□□□ 1.71
LMNB2-204ENST00000527409 GPR20Q99678 358 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 MXRA8Q9BRK3 442 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 C16orf70Q9BSU1 422 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 ALG1Q9BT22 464 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 WNT8AQ9H1J5 351 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 SH3GLB2Q9NR46 395 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 TMEM260Q9NX78 707 aa25.71■■□□□ 1.71
LMNB2-204ENST00000527409 LAMA2P24043 3122 aaKnown RBP25.7■■□□□ 1.71
LMNB2-204ENST00000527409 PITPNM1O00562 1244 aa25.7■■□□□ 1.7
LMNB2-204ENST00000527409 LGALS2P05162 132 aa25.7■■□□□ 1.7
LMNB2-204ENST00000527409 GDF6Q6KF10 455 aaPredicted RBP25.7■■□□□ 1.7
LMNB2-204ENST00000527409 IL23AQ9NPF7 189 aa25.7■■□□□ 1.7
LMNB2-204ENST00000527409 HDAC6Q9UBN7 1215 aa25.7■■□□□ 1.7
LMNB2-204ENST00000527409 H3BRB1 525 aa25.69■■□□□ 1.7
LMNB2-204ENST00000527409 ATP9AO75110 1047 aa25.69■■□□□ 1.7
LMNB2-204ENST00000527409 PPFIA3O75145 1194 aa25.69■■□□□ 1.7
LMNB2-204ENST00000527409 DEXIO95424 95 aa25.69■■□□□ 1.7
LMNB2-204ENST00000527409 CCL23P55773 120 aa25.69■■□□□ 1.7
LMNB2-204ENST00000527409 BFSP2Q13515 415 aa25.69■■□□□ 1.7
LMNB2-204ENST00000527409 JAKMIP3Q5VZ66 844 aa25.69■■□□□ 1.7
LMNB2-204ENST00000527409 CCDC155Q8N6L0 562 aa25.69■■□□□ 1.7
LMNB2-204ENST00000527409 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.69■■□□□ 1.71e-9■□□□□ 9.2
LMNB2-204ENST00000527409 SLKQ9H2G2 1235 aaPredicted RBP25.69■■□□□ 1.7
LMNB2-204ENST00000527409 TUT1Q9H6E5 874 aaKnown RBP25.69■■□□□ 1.7
LMNB2-204ENST00000527409 CDKL5O76039 1030 aa25.68■■□□□ 1.7
LMNB2-204ENST00000527409 SEC24BO95487 1268 aa25.68■■□□□ 1.7
LMNB2-204ENST00000527409 ARHGAP4P98171 946 aa25.68■■□□□ 1.7
LMNB2-204ENST00000527409 CEP55Q53EZ4 464 aa25.68■■□□□ 1.7
LMNB2-204ENST00000527409 KCNH7Q9NS40 1196 aa25.68■■□□□ 1.7
LMNB2-204ENST00000527409 AK2P54819 239 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 SP4Q02446 784 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 TMEM240Q5SV17 173 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 C16orf59Q7L2K0 433 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 NIPA1Q7RTP0 329 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 RPUSD2Q8IZ73 545 aaKnown RBP25.67■■□□□ 1.7
LMNB2-204ENST00000527409 FAM177A1Q8N128 213 aaPredicted RBP25.67■■□□□ 1.7
LMNB2-204ENST00000527409 RETREG2Q8NC44 543 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 CAGE1Q8TC20 777 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 VPS54Q9P1Q0 977 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 ZNF215Q9UL58 517 aaPredicted RBP25.67■■□□□ 1.7
LMNB2-204ENST00000527409 TPCN1Q9ULQ1 816 aa25.67■■□□□ 1.7
LMNB2-204ENST00000527409 TRIP12Q14669 1992 aaPredicted RBP25.67■■□□□ 1.7
LMNB2-204ENST00000527409 PFKFB2O60825 505 aa25.66■■□□□ 1.7
LMNB2-204ENST00000527409 ZNF76P36508 570 aa25.66■■□□□ 1.7
LMNB2-204ENST00000527409 SCRN1Q12765 414 aa25.66■■□□□ 1.7
LMNB2-204ENST00000527409 CTAGE1Q96RT6 745 aa25.66■■□□□ 1.7
LMNB2-204ENST00000527409 MEIS1O00470 390 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 PFKMP08237 780 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 CYP3A4P08684 503 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 ACRP10323 421 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 RFC2P35250 354 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 SMAD3P84022 425 aaKnown RBP25.65■■□□□ 1.7
LMNB2-204ENST00000527409 ZNF365Q70YC5 407 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 CYP2W1Q8TAV3 490 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 CRYGNQ8WXF5 182 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 SCLYQ96I15 445 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 PKD2L1Q9P0L9 805 aa25.65■■□□□ 1.7
LMNB2-204ENST00000527409 SCN5AQ14524 2016 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 NFASCO94856 1347 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 TCF7P36402 384 aaPredicted RBP25.64■■□□□ 1.7
LMNB2-204ENST00000527409 NLRP5P59047 1200 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 RBL2Q08999 1139 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 PTK7Q13308 1070 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 C8orf34Q49A92 452 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 AFAP1L1Q8TED9 768 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 SEPT1Q8WYJ6 367 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 SDF4Q9BRK5 362 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 MTIF3Q9H2K0 278 aaKnown RBP25.64■■□□□ 1.7
LMNB2-204ENST00000527409 JPH1Q9HDC5 661 aaPredicted RBP25.64■■□□□ 1.7
LMNB2-204ENST00000527409 TELO2Q9Y4R8 837 aa25.64■■□□□ 1.7
LMNB2-204ENST00000527409 ADAMTS3O15072 1205 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 FGBP02675 491 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 HOXC8P31273 242 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 NEK4P51957 841 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 UTP14CQ5TAP6 766 aaKnown RBP25.63■■□□□ 1.69
LMNB2-204ENST00000527409 RASIP1Q5U651 963 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 TRIM50Q86XT4 487 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 HERVK_113Q902F9 699 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 AGO4Q9HCK5 861 aaKnown RBP25.63■■□□□ 1.69
LMNB2-204ENST00000527409 SLC9A2Q9UBY0 812 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 KAT6AQ92794 2004 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 STK36Q9NRP7 1315 aa25.63■■□□□ 1.69
LMNB2-204ENST00000527409 C17orf102A2RUQ5 167 aa25.62■■□□□ 1.69
LMNB2-204ENST00000527409 IQCF3P0C7M6 154 aa25.62■■□□□ 1.69
LMNB2-204ENST00000527409 SMIM10L2AP0DMW4 78 aa25.62■■□□□ 1.69
LMNB2-204ENST00000527409 SMIM10L2BP0DMW5 78 aa25.62■■□□□ 1.69
LMNB2-204ENST00000527409 ARP10275 920 aa25.62■■□□□ 1.69
LMNB2-204ENST00000527409 FAM109BQ6ICB4 259 aaPredicted RBP25.62■■□□□ 1.69
LMNB2-204ENST00000527409 RASGRP4Q8TDF6 673 aa25.62■■□□□ 1.69
LMNB2-204ENST00000527409 PCDHA4Q9UN74 947 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms