RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 DHX38Q92620 1227 aaKnown RBP12.7□□□□□ -0.38
NEDD8-204ENST00000526430 ASIC4Q96FT7 647 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 TCEANC2Q96MN5 208 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 ACACBO00763 2458 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
NEDD8-204ENST00000526430 H0Y858 1186 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 PRC1O43663 620 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 AMHP03971 560 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 CKBP12277 381 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 DLX2Q07687 328 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-204ENST00000526430 FBXO11Q86XK2 927 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 TMEM192Q8IY95 271 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 LRRC47Q8N1G4 583 aaKnown RBP12.69□□□□□ -0.38
NEDD8-204ENST00000526430 FBXL16Q8N461 479 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 LRRC2Q9BYS8 371 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 LMAN2LQ9H0V9 348 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 TLR9Q9NR96 1032 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
NEDD8-204ENST00000526430 CD207Q9UJ71 328 aa12.69□□□□□ -0.38
NEDD8-204ENST00000526430 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 C5orf67F2Z3F1 127 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-204ENST00000526430 GALR2O43603 387 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-204ENST00000526430 TBX10O75333 385 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 RGS20O76081 388 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 EYA4O95677 639 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 TOP1P11387 765 aaKnown RBP12.68□□□□□ -0.38
NEDD8-204ENST00000526430 BMP3P12645 472 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 RPS6KB1P23443 525 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 MCM5P33992 734 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 STAT2P52630 851 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 ANAPC15P60006 121 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 HYAL1Q12794 435 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 TRDNQ13061 729 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 KRT32Q14532 448 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 CLUL1Q15846 466 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 SLC35G1Q2M3R5 365 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 GDF6Q6KF10 455 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-204ENST00000526430 TRAF7Q6Q0C0 670 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 PPP1R13LQ8WUF5 828 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 JAKMIP1Q96N16 626 aaKnown RBP12.68□□□□□ -0.38
NEDD8-204ENST00000526430 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 CEP250Q9BV73 2442 aa12.68□□□□□ -0.38
NEDD8-204ENST00000526430 EMSYQ7Z589 1322 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 WDR19Q8NEZ3 1342 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
NEDD8-204ENST00000526430 LGR5O75473 907 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 ALAS1P13196 640 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 LIFRP42702 1097 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 ALDH5A1P51649 535 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-204ENST00000526430 TROAPQ12815 778 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 TOB2Q14106 344 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-204ENST00000526430 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.67□□□□□ -0.387e-16■■■□□ 19.1
NEDD8-204ENST00000526430 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
NEDD8-204ENST00000526430 FAM160B2Q86V87 743 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 MSLNLQ96KJ4 702 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 TBC1D32Q96NH3 1257 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 STX8Q9UNK0 236 aa12.67□□□□□ -0.38
NEDD8-204ENST00000526430 PLA2G6O60733 806 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 PDHBP11177 359 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 CASTP20810 708 aaKnown RBP12.66□□□□□ -0.38
NEDD8-204ENST00000526430 MCCP23508 829 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 EVCP57679 992 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 MBTPS1Q14703 1052 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 MUM1L1Q5H9M0 696 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 TTBK2Q6IQ55 1244 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 SGMS1Q86VZ5 419 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 MYOCDQ8IZQ8 938 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 SMRP1Q8NCR6 262 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 SCFD2Q8WU76 684 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 CHURC1Q8WUH1 139 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 TMEM87BQ96K49 555 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 YME1L1Q96TA2 773 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 GTF2IRD1Q9UHL9 959 aa12.66□□□□□ -0.38
NEDD8-204ENST00000526430 CHD6Q8TD26 2715 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 TMEM232C9JQI7 657 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 KRT37O76014 449 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 RB1P06400 928 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 PTK7Q13308 1070 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 ADAM15Q13444 863 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 TRIM71Q2Q1W2 868 aaKnown RBP12.65□□□□□ -0.38
NEDD8-204ENST00000526430 CCDC178Q5BJE1 867 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 MCTP2Q6DN12 878 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 Q6ZUG5 572 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
NEDD8-204ENST00000526430 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms