RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 GPRASP2Q96D09 838 aa15.4■□□□□ 0.06
USH1C-203ENST00000526181 GPR20Q99678 358 aa15.4■□□□□ 0.06
USH1C-203ENST00000526181 KATNAL1Q9BW62 490 aa15.4■□□□□ 0.06
USH1C-203ENST00000526181 UBIAD1Q9Y5Z9 338 aa15.4■□□□□ 0.06
USH1C-203ENST00000526181 CYP46A1Q9Y6A2 500 aa15.4■□□□□ 0.06
USH1C-203ENST00000526181 NOP56O00567 594 aaKnown RBP15.39■□□□□ 0.05
USH1C-203ENST00000526181 IQCF3P0C7M6 154 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 KCNA2P16389 499 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 CLK2P49760 499 aaKnown RBP15.39■□□□□ 0.05
USH1C-203ENST00000526181 MTMR1Q13613 665 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 NTRK3Q16288 839 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 ZNF697Q5TEC3 545 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 CYP2W1Q8TAV3 490 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 HERVK_113Q902F9 699 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 WNT8BQ93098 351 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 GUCD1Q96NT3 240 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 ANO3Q9BYT9 981 aa15.39■□□□□ 0.05
USH1C-203ENST00000526181 TTYH1Q9H313 450 aaPredicted RBP15.39■□□□□ 0.05
USH1C-203ENST00000526181 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.38■□□□□ 0.05
USH1C-203ENST00000526181 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.38■□□□□ 0.05
USH1C-203ENST00000526181 PITPNM1O00562 1244 aa15.38■□□□□ 0.05
USH1C-203ENST00000526181 PRPF3O43395 683 aaKnown RBP15.38■□□□□ 0.05
USH1C-203ENST00000526181 PBX2P40425 430 aa15.38■□□□□ 0.05
USH1C-203ENST00000526181 UTP14CQ5TAP6 766 aaKnown RBP15.38■□□□□ 0.05
USH1C-203ENST00000526181 RETREG2Q8NC44 543 aa15.38■□□□□ 0.05
USH1C-203ENST00000526181 SENP7Q9BQF6 1050 aa15.38■□□□□ 0.05
USH1C-203ENST00000526181 SLC26A6Q9BXS9 759 aa15.38■□□□□ 0.05
USH1C-203ENST00000526181 TM6SF1Q9BZW5 370 aa15.38■□□□□ 0.05
USH1C-203ENST00000526181 JADE2Q9NQC1 790 aa15.38■□□□□ 0.05
USH1C-203ENST00000526181 TANC1Q9C0D5 1861 aa15.37■□□□□ 0.05
USH1C-203ENST00000526181 H3BRB1 525 aa15.37■□□□□ 0.05
USH1C-203ENST00000526181 STK3Q13188 491 aa15.37■□□□□ 0.05
USH1C-203ENST00000526181 BFSP2Q13515 415 aa15.37■□□□□ 0.05
USH1C-203ENST00000526181 JAKMIP3Q5VZ66 844 aa15.37■□□□□ 0.05
USH1C-203ENST00000526181 MXRA8Q9BRK3 442 aa15.37■□□□□ 0.05
USH1C-203ENST00000526181 TUT1Q9H6E5 874 aaKnown RBP15.37■□□□□ 0.05
USH1C-203ENST00000526181 EHMT1Q9H9B1 1298 aa15.37■□□□□ 0.05
USH1C-203ENST00000526181 PDRG1Q9NUG6 133 aa15.37■□□□□ 0.05
USH1C-203ENST00000526181 DOCK5Q9H7D0 1870 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 SMIM10L2AP0DMW4 78 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 SMIM10L2BP0DMW5 78 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 IFNAR1P17181 557 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 DNAJB2P25686 324 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 TCF7P36402 384 aaPredicted RBP15.36■□□□□ 0.05
USH1C-203ENST00000526181 PTK7Q13308 1070 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 AP3B2Q13367 1082 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 GPNMBQ14956 572 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 TRIM71Q2Q1W2 868 aaKnown RBP15.36■□□□□ 0.05
USH1C-203ENST00000526181 LRRC8DQ7L1W4 858 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 RPUSD2Q8IZ73 545 aaKnown RBP15.36■□□□□ 0.05
USH1C-203ENST00000526181 CCDC155Q8N6L0 562 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 CAGE1Q8TC20 777 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 CDHR1Q96JP9 859 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 RNF26Q9BY78 433 aaPredicted RBP15.36■□□□□ 0.05
USH1C-203ENST00000526181 PBX4Q9BYU1 374 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 SEMA6BQ9H3T3 888 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 KCNH7Q9NS40 1196 aa15.36■□□□□ 0.05
USH1C-203ENST00000526181 GSTTP1A0A1W2PQM5 241 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 ESYT2A0FGR8 921 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 ZBBXA8MT70 800 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 FOSP01100 380 aaPredicted RBP15.35■□□□□ 0.05
USH1C-203ENST00000526181 PFKMP08237 780 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 ARP10275 920 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 CKBP12277 381 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 SELPP16109 830 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 RFC2P35250 354 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 SREBF1P36956 1147 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 TRAF7Q6Q0C0 670 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 GIMAP8Q8ND71 665 aaPredicted RBP15.35■□□□□ 0.05
USH1C-203ENST00000526181 RASGRP4Q8TDF6 673 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 AFAP1L1Q8TED9 768 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 ZMYND12Q9H0C1 365 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 VPS54Q9P1Q0 977 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 MYH7BA7E2Y1 1941 aa15.35■□□□□ 0.05
USH1C-203ENST00000526181 C17orf102A2RUQ5 167 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 TREHO43280 583 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 DTNBO60941 627 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 SEC24BO95487 1268 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 HOXC8P31273 242 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 ARHGAP4P98171 946 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 AKAP17AQ02040 695 aaKnown RBP15.34■□□□□ 0.05
USH1C-203ENST00000526181 RBL2Q08999 1139 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 ITGB3BPQ13352 177 aaPredicted RBP15.34■□□□□ 0.05
USH1C-203ENST00000526181 TCTN1Q2MV58 587 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 CEP55Q53EZ4 464 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 ZNF618Q5T7W0 954 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 SERINC5Q86VE9 423 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 TEX2Q8IWB9 1127 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 ATP6V0A1Q93050 837 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 TIFAQ96CG3 184 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 ZNF274Q96GC6 653 aaPredicted RBP15.34■□□□□ 0.05
USH1C-203ENST00000526181 CDX2Q99626 313 aaPredicted RBP15.34■□□□□ 0.05
USH1C-203ENST00000526181 FTOQ9C0B1 505 aaKnown RBP eCLIP15.34■□□□□ 0.05
USH1C-203ENST00000526181 GLT8D2Q9H1C3 349 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 MTIF3Q9H2K0 278 aaKnown RBP15.34■□□□□ 0.05
USH1C-203ENST00000526181 RNPEPQ9H4A4 650 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 C6orf50Q9HD87 102 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 SETD4Q9NVD3 440 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 STXBP5LQ9Y2K9 1186 aa15.34■□□□□ 0.05
USH1C-203ENST00000526181 SCN5AQ14524 2016 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms