RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 EEPD1Q7L9B9 569 aa6.86□□□□□ -1.31
CSDE1-210ENST00000525878 SLC6A20Q9NP91 592 aa6.86□□□□□ -1.31
CSDE1-210ENST00000525878 A0A1W2PQU0 124 aa6.85□□□□□ -1.31
CSDE1-210ENST00000525878 PPP2CBP62714 309 aa6.85□□□□□ -1.31
CSDE1-210ENST00000525878 PPP2CAP67775 309 aa6.85□□□□□ -1.31
CSDE1-210ENST00000525878 ICAM4Q14773 271 aa6.85□□□□□ -1.31
CSDE1-210ENST00000525878 KLHL36Q8N4N3 616 aa6.85□□□□□ -1.31
CSDE1-210ENST00000525878 IGDCC4Q8TDY8 1250 aa6.85□□□□□ -1.31
CSDE1-210ENST00000525878 ZNF408Q9H9D4 720 aa6.85□□□□□ -1.31
CSDE1-210ENST00000525878 TSC22D4Q9Y3Q8 395 aa6.85□□□□□ -1.31
CSDE1-210ENST00000525878 DLX3O60479 287 aa6.84□□□□□ -1.31
CSDE1-210ENST00000525878 MAFKO60675 156 aa6.84□□□□□ -1.31
CSDE1-210ENST00000525878 MSCO60682 206 aa6.84□□□□□ -1.31
CSDE1-210ENST00000525878 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-210ENST00000525878 RSPO2Q6UXX9 243 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-210ENST00000525878 KBTBD2Q8IY47 623 aa6.84□□□□□ -1.31
CSDE1-210ENST00000525878 KCTD13Q8WZ19 329 aa6.84□□□□□ -1.31
CSDE1-210ENST00000525878 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.84□□□□□ -1.31
CSDE1-210ENST00000525878 RBPJLQ9UBG7 517 aa6.84□□□□□ -1.31
CSDE1-210ENST00000525878 CROTQ9UKG9 612 aa6.84□□□□□ -1.31
CSDE1-210ENST00000525878 KRIT1O00522 736 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 NFATC3Q12968 1075 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 TMC5Q6UXY8 1006 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 TRIM48Q8IWZ4 208 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 DTX3Q8N9I9 347 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 PIP4K2CQ8TBX8 421 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 CLEC4DQ8WXI8 215 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 IER2Q9BTL4 223 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 JAM3Q9BX67 310 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 FTSJ1Q9UET6 329 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 ADAM29Q9UKF5 820 aa6.83□□□□□ -1.32
CSDE1-210ENST00000525878 NPEPPSL1A6NEC2 478 aa6.82□□□□□ -1.32
CSDE1-210ENST00000525878 AGRPO00253 132 aa6.82□□□□□ -1.32
CSDE1-210ENST00000525878 KLHL18O94889 574 aa6.82□□□□□ -1.32
CSDE1-210ENST00000525878 ARHGEF18Q6ZSZ5 1173 aa6.82□□□□□ -1.32
CSDE1-210ENST00000525878 PPARGC1AQ9UBK2 798 aaKnown RBP6.82□□□□□ -1.32
CSDE1-210ENST00000525878 SLC27A2O14975 620 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 CHGBP05060 677 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 HABP4Q5JVS0 413 aaKnown RBP6.81□□□□□ -1.32
CSDE1-210ENST00000525878 SLFN13Q68D06 897 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 TRMT10BQ6PF06 316 aaKnown RBP6.81□□□□□ -1.32
CSDE1-210ENST00000525878 OTOP3Q7RTS5 596 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 SPRED1Q7Z699 444 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 CIR1Q86X95 450 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-210ENST00000525878 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 CELF2-AS1Q8N7Q2 184 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 SLC16A11Q8NCK7 471 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 NUDT10Q8NFP7 164 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 SH3RF3Q8TEJ3 882 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-210ENST00000525878 NUDT11Q96G61 164 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 PTPN18Q99952 460 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 TINF2Q9BSI4 451 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 KLC2Q9H0B6 622 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 MEGF9Q9H1U4 602 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 DLL4Q9NR61 685 aa6.81□□□□□ -1.32
CSDE1-210ENST00000525878 PATE3B3GLJ2 98 aa6.8□□□□□ -1.32
CSDE1-210ENST00000525878 GNL2Q13823 731 aaKnown RBP6.8□□□□□ -1.32
CSDE1-210ENST00000525878 R3HDM1Q15032 1099 aaKnown RBP6.8□□□□□ -1.32
CSDE1-210ENST00000525878 Q8N1X5 172 aa6.8□□□□□ -1.32
CSDE1-210ENST00000525878 UHMK1Q8TAS1 419 aaKnown RBP6.8□□□□□ -1.32
CSDE1-210ENST00000525878 KISS1RQ969F8 398 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-210ENST00000525878 SGSM3Q96HU1 749 aa6.8□□□□□ -1.32
CSDE1-210ENST00000525878 PHF20Q9BVI0 1012 aa6.8□□□□□ -1.32
CSDE1-210ENST00000525878 BARX1Q9HBU1 254 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-210ENST00000525878 B4GALT4O60513 344 aa6.79□□□□□ -1.32
CSDE1-210ENST00000525878 KNG1P01042 644 aa6.79□□□□□ -1.32
CSDE1-210ENST00000525878 VASNQ6EMK4 673 aa6.79□□□□□ -1.32
CSDE1-210ENST00000525878 CRIP3Q6Q6R5 217 aa6.79□□□□□ -1.32
CSDE1-210ENST00000525878 LBX2Q6XYB7 198 aa6.79□□□□□ -1.32
CSDE1-210ENST00000525878 USP53Q70EK8 1073 aa6.79□□□□□ -1.32
CSDE1-210ENST00000525878 CDK5RAP1Q96SZ6 601 aaKnown RBP6.79□□□□□ -1.32
CSDE1-210ENST00000525878 FSHBP01225 129 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 C6P13671 934 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 FAHP16930 419 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 TACR2P21452 398 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 ARID5AQ03989 594 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 GRIN1Q05586 938 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 TUSC3Q13454 348 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 HSP90AA2PQ14568 343 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-210ENST00000525878 SMAD2Q15796 467 aaKnown RBP6.78□□□□□ -1.32
CSDE1-210ENST00000525878 NTRK3Q16288 839 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 DDR2Q16832 855 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 PAN2Q504Q3 1202 aaKnown RBP6.78□□□□□ -1.32
CSDE1-210ENST00000525878 DCAF4Q8WV16 495 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 HNRNPLLQ8WVV9 542 aaKnown RBP6.78□□□□□ -1.32
CSDE1-210ENST00000525878 AJUBAQ96IF1 538 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 SORCS2Q96PQ0 1159 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 ZFYVE21Q9BQ24 234 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 ARHGEF4Q9NR80 690 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 TELO2Q9Y4R8 837 aa6.78□□□□□ -1.32
CSDE1-210ENST00000525878 KLF4O43474 513 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 CNOT4O95628 575 aaKnown RBP6.77□□□□□ -1.33
CSDE1-210ENST00000525878 CKMP06732 381 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 FGFR1P11362 822 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 TCF3P15923 654 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 GRK2P25098 689 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 GRK3P35626 688 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 EPHA5P54756 1037 aa6.77□□□□□ -1.33
CSDE1-210ENST00000525878 KCNT2Q6UVM3 1135 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms