RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 NOP56O00567 594 aaKnown RBP19.82■□□□□ 0.76
TSKU-202ENST00000525167 LGALS2P05162 132 aa19.82■□□□□ 0.76
TSKU-202ENST00000525167 GNAT1P11488 350 aa19.82■□□□□ 0.76
TSKU-202ENST00000525167 HTRA4P83105 476 aaPredicted RBP19.82■□□□□ 0.76
TSKU-202ENST00000525167 PLEKHG4Q58EX7 1191 aa19.82■□□□□ 0.76
TSKU-202ENST00000525167 XRRA1Q6P2D8 792 aa19.82■□□□□ 0.76
TSKU-202ENST00000525167 CATIPQ7Z7H3 387 aa19.82■□□□□ 0.76
TSKU-202ENST00000525167 DBF4BQ8NFT6 615 aa19.82■□□□□ 0.76
TSKU-202ENST00000525167 SP7Q8TDD2 431 aaPredicted RBP19.82■□□□□ 0.76
TSKU-202ENST00000525167 COL4A6Q14031 1691 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 SPATA31C2B4DYI2 1134 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 E7EWF7 191 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 FIBPO43427 364 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 SORBS3O60504 671 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 SMIM10L2AP0DMW4 78 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 SMIM10L2BP0DMW5 78 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 MRPS9P82933 396 aaKnown RBP19.81■□□□□ 0.76
TSKU-202ENST00000525167 SEPT8Q92599 483 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 GPKOWQ92917 476 aaPredicted RBP eCLIP19.81■□□□□ 0.76
TSKU-202ENST00000525167 SAMD11Q96NU1 681 aa19.81■□□□□ 0.76
TSKU-202ENST00000525167 CHMLP26374 656 aa19.8■□□□□ 0.76
TSKU-202ENST00000525167 PTH1RQ03431 593 aa19.8■□□□□ 0.76
TSKU-202ENST00000525167 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.8■□□□□ 0.76
TSKU-202ENST00000525167 MYOCDQ8IZQ8 938 aa19.8■□□□□ 0.76
TSKU-202ENST00000525167 SENP7Q9BQF6 1050 aa19.8■□□□□ 0.76
TSKU-202ENST00000525167 MTA3Q9BTC8 594 aa19.8■□□□□ 0.76
TSKU-202ENST00000525167 SPZ1Q9BXG8 430 aa19.8■□□□□ 0.76
TSKU-202ENST00000525167 RNPEPQ9H4A4 650 aa19.8■□□□□ 0.76
TSKU-202ENST00000525167 ZNF215Q9UL58 517 aaPredicted RBP19.8■□□□□ 0.76
TSKU-202ENST00000525167 MTUS1Q9ULD2 1270 aa19.8■□□□□ 0.76
TSKU-202ENST00000525167 TREHO43280 583 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 PDE4AP27815 886 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 SMARCA1P28370 1054 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 PCNX4Q63HM2 1172 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 FAM117BQ6P1L5 589 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 FBXO22Q8NEZ5 403 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 APBB2Q92870 758 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 GPR20Q99678 358 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 SENP2Q9HC62 589 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 MICAL3Q7RTP6 2002 aa19.79■□□□□ 0.76
TSKU-202ENST00000525167 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.78■□□□□ 0.76
TSKU-202ENST00000525167 PIK3CDO00329 1044 aa19.78■□□□□ 0.76
TSKU-202ENST00000525167 KIF5BP33176 963 aa19.78■□□□□ 0.76
TSKU-202ENST00000525167 SEMA3FQ13275 785 aa19.78■□□□□ 0.76
TSKU-202ENST00000525167 CYFIP1Q7L576 1253 aa19.78■□□□□ 0.76
TSKU-202ENST00000525167 GIMAP8Q8ND71 665 aaPredicted RBP19.78■□□□□ 0.76
TSKU-202ENST00000525167 IGDCC4Q8TDY8 1250 aa19.78■□□□□ 0.76
TSKU-202ENST00000525167 CUL5Q93034 780 aa19.78■□□□□ 0.76
TSKU-202ENST00000525167 TOP1MTQ969P6 601 aa19.78■□□□□ 0.76
TSKU-202ENST00000525167 ZFP91Q96JP5 570 aaPredicted RBP19.78■□□□□ 0.76
TSKU-202ENST00000525167 UBE2ZQ9H832 354 aaPredicted RBP19.78■□□□□ 0.76
TSKU-202ENST00000525167 ARIH1Q9Y4X5 557 aaPredicted RBP19.78■□□□□ 0.76
TSKU-202ENST00000525167 SGSM2O43147 1006 aa19.77■□□□□ 0.76
TSKU-202ENST00000525167 DDAH1O94760 285 aa19.77■□□□□ 0.76
TSKU-202ENST00000525167 ADAM17P78536 824 aa19.77■□□□□ 0.76
TSKU-202ENST00000525167 PTPROQ16827 1216 aa19.77■□□□□ 0.76
TSKU-202ENST00000525167 MB21D2Q8IYB1 491 aaPredicted RBP19.77■□□□□ 0.76
TSKU-202ENST00000525167 CTCFLQ8NI51 663 aaPredicted RBP19.77■□□□□ 0.76
TSKU-202ENST00000525167 SMARCC2Q8TAQ2 1214 aa19.77■□□□□ 0.76
TSKU-202ENST00000525167 MRPL38Q96DV4 380 aaKnown RBP19.77■□□□□ 0.76
TSKU-202ENST00000525167 RRP36Q96EU6 259 aaKnown RBP19.77■□□□□ 0.76
TSKU-202ENST00000525167 LZTS2Q9BRK4 669 aa19.77■□□□□ 0.76
TSKU-202ENST00000525167 C17orf80Q9BSJ5 609 aa19.77■□□□□ 0.76
TSKU-202ENST00000525167 BCAS3Q9H6U6 928 aa19.77■□□□□ 0.76
TSKU-202ENST00000525167 PLA2G5P39877 138 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 GNAQP50148 359 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 ANTXR2P58335 489 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 LEXMQ3ZCV2 418 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 FAM26DQ5JW98 314 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 RPAINQ86UA6 219 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 NLRX1Q86UT6 975 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 MAP4K1Q92918 833 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 CDHR1Q96JP9 859 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 YME1L1Q96TA2 773 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 SETD4Q9NVD3 440 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 SEC63Q9UGP8 760 aaKnown RBP19.76■□□□□ 0.75
TSKU-202ENST00000525167 TAF6LQ9Y6J9 622 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 NRCAMQ92823 1304 aa19.76■□□□□ 0.75
TSKU-202ENST00000525167 EPC2Q52LR7 807 aa19.75■□□□□ 0.75
TSKU-202ENST00000525167 TIGD5Q53EQ6 642 aa19.75■□□□□ 0.75
TSKU-202ENST00000525167 ZNF654Q8IZM8 581 aa19.75■□□□□ 0.75
TSKU-202ENST00000525167 TMTC2Q8N394 836 aa19.75■□□□□ 0.75
TSKU-202ENST00000525167 RTEL1Q9NZ71 1219 aa19.75■□□□□ 0.75
TSKU-202ENST00000525167 RAPGEFL1Q9UHV5 662 aa19.75■□□□□ 0.75
TSKU-202ENST00000525167 BAZ2BQ9UIF8 2168 aaKnown RBP19.74■□□□□ 0.75
TSKU-202ENST00000525167 MEIS2O14770 477 aa19.74■□□□□ 0.75
TSKU-202ENST00000525167 CTSHP09668 335 aa19.74■□□□□ 0.75
TSKU-202ENST00000525167 TAF2Q6P1X5 1199 aa19.74■□□□□ 0.75
TSKU-202ENST00000525167 CASC1Q6TDU7 716 aa19.74■□□□□ 0.75
TSKU-202ENST00000525167 TRIM50Q86XT4 487 aa19.74■□□□□ 0.75
TSKU-202ENST00000525167 LMBR1Q8WVP7 490 aa19.74■□□□□ 0.75
TSKU-202ENST00000525167 GPRASP2Q96D09 838 aa19.74■□□□□ 0.75
TSKU-202ENST00000525167 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
TSKU-202ENST00000525167 IFIH1Q9BYX4 1025 aaKnown RBP19.74■□□□□ 0.75
TSKU-202ENST00000525167 LY9Q9HBG7 655 aa19.74■□□□□ 0.75
TSKU-202ENST00000525167 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.73■□□□□ 0.75
TSKU-202ENST00000525167 H3BNC9 293 aa19.73■□□□□ 0.75
TSKU-202ENST00000525167 ARHGAP4P98171 946 aa19.73■□□□□ 0.75
TSKU-202ENST00000525167 PUS10Q3MIT2 529 aaKnown RBP19.73■□□□□ 0.75
TSKU-202ENST00000525167 TMEM31Q5JXX7 168 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms