RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 C16orf70Q9BSU1 422 aa14.7□□□□□ -0.06
TRAPPC4-205ENST00000525079 KATNAL1Q9BW62 490 aa14.7□□□□□ -0.06
TRAPPC4-205ENST00000525079 JADE2Q9NQC1 790 aa14.7□□□□□ -0.06
TRAPPC4-205ENST00000525079 DTNBO60941 627 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 FOSP01100 380 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 LGALS2P05162 132 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 KCNA2P16389 499 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 CLK2P49760 499 aaKnown RBP14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 HIC1Q14526 733 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 DEFB128Q7Z7B8 93 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 SESTD1Q86VW0 696 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 RETREG2Q8NC44 543 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 ZNF274Q96GC6 653 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 CTAGE1Q96RT6 745 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 SENP7Q9BQF6 1050 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 MXRA8Q9BRK3 442 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 RNF26Q9BY78 433 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 VPS54Q9P1Q0 977 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 GTF2IRD1Q9UHL9 959 aa14.69□□□□□ -0.06
TRAPPC4-205ENST00000525079 H3BRB1 525 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 CPLX1O14810 134 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 FGBP02675 491 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 ARP10275 920 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 SSRP1Q08945 709 aaKnown RBP14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 AP3B2Q13367 1082 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 FAM109BQ6ICB4 259 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 OTOP2Q7RTS6 562 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 TRIM50Q86XT4 487 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 RASGRP4Q8TDF6 673 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 DHX38Q92620 1227 aaKnown RBP14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 VWCEQ96DN2 955 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 CDHR1Q96JP9 859 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 FAM161BQ96MY7 647 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 UIMC1Q96RL1 719 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 ZMYND12Q9H0C1 365 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 GLT8D2Q9H1C3 349 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 TUT1Q9H6E5 874 aaKnown RBP14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 C6orf50Q9HD87 102 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 SCN5AQ14524 2016 aa14.68□□□□□ -0.06
TRAPPC4-205ENST00000525079 ESYT2A0FGR8 921 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 GRXCR1A8MXD5 290 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 IQCF3P0C7M6 154 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 ZNF76P36508 570 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 SREBF1P36956 1147 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 ANAPC15P60006 121 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 BFSP2Q13515 415 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 GPR153Q6NV75 609 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 PSRC1Q6PGN9 363 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 TRIM22Q8IYM9 498 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 RPUSD2Q8IZ73 545 aaKnown RBP14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 GIMAP8Q8ND71 665 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 CCDC12Q8WUD4 166 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 KCNH7Q9NS40 1196 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 CXXC1Q9P0U4 656 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 TPCN1Q9ULQ1 816 aa14.67□□□□□ -0.06
TRAPPC4-205ENST00000525079 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 GSTTP1A0A1W2PQM5 241 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 SMIM10L2AP0DMW4 78 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 SMIM10L2BP0DMW5 78 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 TCF7P36402 384 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 AK2P54819 239 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 SMAD3P84022 425 aaKnown RBP14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 ARHGAP4P98171 946 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 SCRN1Q12765 414 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 CEP55Q53EZ4 464 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 REXO1Q8N1G1 1221 aaKnown RBP14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 WNT8BQ93098 351 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 AIFM3Q96NN9 605 aa14.66□□□□□ -0.06
TRAPPC4-205ENST00000525079 TRIP12Q14669 1992 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 C17orf102A2RUQ5 167 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 MAFGO15525 162 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 GNA11P29992 359 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 NLRP5P59047 1200 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 PTK7Q13308 1070 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 RASIP1Q5U651 963 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 TEX2Q8IWB9 1127 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 CCDC155Q8N6L0 562 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 SEPT1Q8WYJ6 367 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 HERVK_113Q902F9 699 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 FTOQ9C0B1 505 aaKnown RBP eCLIP14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 RNPEPQ9H4A4 650 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 AGO4Q9HCK5 861 aaKnown RBP14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 SETD4Q9NVD3 440 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 MTMR10Q9NXD2 777 aa14.65□□□□□ -0.06
TRAPPC4-205ENST00000525079 ZBBXA8MT70 800 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 FAM86B1E9PN63 330 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 DDX39AO00148 427 aaKnown RBP14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 MEIS1O00470 390 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 TREHO43280 583 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 DEXIO95424 95 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 FAM86B2P0C5J1 330 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 CKBP12277 381 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 SELPP16109 830 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 MARK3P27448 753 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 ITGB3BPQ13352 177 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 ZNF697Q5TEC3 545 aa14.64□□□□□ -0.07
TRAPPC4-205ENST00000525079 CPLX2Q6PUV4 134 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms