RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 FAM26EQ8N5C1 309 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 ST13P5Q8NFI4 369 aaPredicted RBP4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 SGSM3Q96HU1 749 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 AARSD1Q9BTE6 412 aaKnown RBP4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 ARHGEF4Q9NR80 690 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 CLDND1Q9NY35 253 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 X6R8D5 127 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 LAMC3Q9Y6N6 1575 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 CADPSQ9ULU8 1353 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 MROH6A6NGR9 719 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 DLX3O60479 287 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 CAPNS1P04632 268 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 TNFRSF1AP19438 455 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 ITGA1P56199 1179 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 TESK1Q15569 626 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 YOD1Q5VVQ6 348 aaPredicted RBP4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 CPZQ66K79 652 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 BORAQ6PGQ7 559 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 LRRC47Q8N1G4 583 aaKnown RBP4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 C8orf37Q96NL8 207 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 SYT3Q9BQG1 590 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 YIPF4Q9BSR8 244 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 PHF20Q9BVI0 1012 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 PFDN2Q9UHV9 154 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 INVSQ9Y283 1065 aa4.84□□□□□ -1.63
LINCR-0001-203ENST00000524047 TRAV20A0A0B4J274 112 aa4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 C9orf118A6NHY6 69 aa4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 PDPK1O15530 556 aa4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 PABPC1P11940 636 aaKnown RBP4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 MTERF2Q49AM1 385 aa4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 MCTP2Q6DN12 878 aa4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 NSMFQ6X4W1 530 aa4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 SPATC1Q76KD6 591 aa4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 TXNDC5Q8NBS9 432 aaKnown RBP4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 SSBP3Q9BWW4 388 aaPredicted RBP4.83□□□□□ -1.64
LINCR-0001-203ENST00000524047 BLACEA4D250 179 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 H7BY64 318 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 MSCO60682 206 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 DGKIO75912 1065 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 CENPBP07199 599 aaPredicted RBP4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 FGFR1P11362 822 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 STAT5AP42229 794 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 NKX3-2P78367 333 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 SSRP1Q08945 709 aaKnown RBP4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 IFRD2Q12894 506 aaPredicted RBP4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 CR1LQ2VPA4 569 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 NBPF6Q5VWK0 638 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 STEAP3Q658P3 488 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 KCNT2Q6UVM3 1135 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 OSBP2Q969R2 916 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 LOXL4Q96JB6 756 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 NBPF4Q96M43 638 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 HIRIP3Q9BW71 556 aaPredicted RBP4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 SPATA9Q9BWV2 254 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 GPR27Q9NS67 375 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 ZNF652Q9Y2D9 606 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 MSRB2Q9Y3D2 182 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 NPFFR2Q9Y5X5 522 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 DNMBPQ6XZF7 1577 aa4.82□□□□□ -1.64
LINCR-0001-203ENST00000524047 PRXQ9BXM0 1461 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 KIF27Q86VH2 1401 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 DDX3XO00571 662 aaKnown RBP eCLIP4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 HGSO14964 777 aaPredicted RBP4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 MATN3O15232 486 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 ZNF20P17024 532 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 ADAM9Q13443 819 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 SURF1Q15526 300 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 CHRNA2Q15822 529 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 STK32CQ86UX6 486 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 DCAF4Q8WV16 495 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 LCORQ96JN0 433 aaPredicted RBP4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 C8orf49Q96NF6 230 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 CDC6Q99741 560 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 JAM3Q9BX67 310 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 EPB41L1Q9H4G0 881 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 SIRPGQ9P1W8 387 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 PPARGC1AQ9UBK2 798 aaKnown RBP4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 PCDHB4Q9Y5E5 795 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 WDR97A6NE52 1622 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 RAPGEF2Q9Y4G8 1499 aa4.81□□□□□ -1.64
LINCR-0001-203ENST00000524047 CUL7Q14999 1698 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 ZNF28P17035 718 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 ZEB1P37275 1124 aaPredicted RBP4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 ZXDAP98168 799 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 RASGRF1Q13972 1273 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 NTRK3Q16288 839 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 GLB1LQ6UWU2 654 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 ARRDC4Q8NCT1 418 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 DVL3Q92997 716 aaPredicted RBP4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 ZNF669Q96BR6 464 aaPredicted RBP4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 IPO9Q96P70 1041 aaKnown RBP4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 KCNJ15Q99712 375 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 CCDC113Q9H0I3 377 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 FANCD2Q9BXW9 1451 aa4.8□□□□□ -1.64
LINCR-0001-203ENST00000524047 ZNF536O15090 1300 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 KRIT1O00522 736 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 ADCY3O60266 1144 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 B4GALT3O60512 393 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms