RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 PIK3CDO00329 1044 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 SMIM10L2AP0DMW4 78 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 SMIM10L2BP0DMW5 78 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 MRPS5P82675 430 aaKnown RBP21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 CREB3L3Q68CJ9 461 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 METTL7BQ6UX53 244 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 NFXL1Q6ZNB6 911 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 SKAP1Q86WV1 359 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 SMARCC2Q8TAQ2 1214 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 TMEM87BQ96K49 555 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 GPR20Q99678 358 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 LZTS2Q9BRK4 669 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 TRANK1O15050 2925 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 ABHD14A-ACY1A0A1B0GW23 586 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 CCDC69A6NI79 296 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 NOP56O00567 594 aaKnown RBP21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 FIBPO43427 364 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 THPOP40225 353 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 NEDD9Q14511 834 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 PCNX4Q63HM2 1172 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 TMTC2Q8N394 836 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 ATP6V0A1Q93050 837 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 LRRC2Q9BYS8 371 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 RNPEPQ9H4A4 650 aa21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 SEC63Q9UGP8 760 aaKnown RBP21.66■■□□□ 1.06
PTP4A3-206ENST00000524028 REV3LO60673 3130 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 PTPRSQ13332 1948 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 hCG_1642624A0A1W2PR95 340 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 TREHO43280 583 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 LPXNO60711 386 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 LIFRP42702 1097 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 GNAQP50148 359 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 IKBKEQ14164 716 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 TRIM50Q86XT4 487 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 CUL5Q93034 780 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 ZBED2Q9BTP6 218 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 USP26Q9BXU7 913 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 OSBPL7Q9BZF2 842 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 MUC3AQ02505 3323 aa21.65■■□□□ 1.06
PTP4A3-206ENST00000524028 RSPH10B2B2RC85 870 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 TNFRSF10AO00220 468 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 LGR5O75473 907 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 GJB5O95377 273 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 RSPH10BP0C881 870 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 TFF2Q03403 129 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 GRB10Q13322 594 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 MKRN4PQ13434 485 aaPredicted RBP21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 DBF4BQ8NFT6 615 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 ADAMTS19Q8TE59 1207 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 SETD4Q9NVD3 440 aa21.64■■□□□ 1.05
PTP4A3-206ENST00000524028 GTPBP6O43824 516 aaPredicted RBP21.63■■□□□ 1.05
PTP4A3-206ENST00000524028 XRRA1Q6P2D8 792 aa21.63■■□□□ 1.05
PTP4A3-206ENST00000524028 CCDC82Q8N4S0 544 aa21.63■■□□□ 1.05
PTP4A3-206ENST00000524028 RAD9AQ99638 391 aa21.63■■□□□ 1.05
PTP4A3-206ENST00000524028 SENP7Q9BQF6 1050 aa21.63■■□□□ 1.05
PTP4A3-206ENST00000524028 PSTPIP2Q9H939 334 aa21.63■■□□□ 1.05
PTP4A3-206ENST00000524028 ANO2Q9NQ90 1003 aa21.63■■□□□ 1.05
PTP4A3-206ENST00000524028 EMSYQ7Z589 1322 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 EFCAB14O75071 495 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 ATP9AO75110 1047 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 CALM1P0DP23 149 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 CALM2P0DP24 149 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 CALM3P0DP25 149 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 SP4Q02446 784 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 UBE2SQ16763 222 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 UTP14CQ5TAP6 766 aaKnown RBP21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 FAM117BQ6P1L5 589 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 TMTC3Q6ZXV5 915 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 FANCBQ8NB91 859 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 TSPYL2Q9H2G4 693 aaPredicted RBP21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 SLC12A7Q9Y666 1083 aa21.62■■□□□ 1.05
PTP4A3-206ENST00000524028 PRRC2BQ5JSZ5 2229 aaKnown RBP21.61■■□□□ 1.05
PTP4A3-206ENST00000524028 XIRP2A4UGR9 3374 aa21.61■■□□□ 1.05
PTP4A3-206ENST00000524028 BMP1P13497 986 aa21.61■■□□□ 1.05
PTP4A3-206ENST00000524028 ITGB5P18084 799 aa21.61■■□□□ 1.05
PTP4A3-206ENST00000524028 ADAM17P78536 824 aa21.61■■□□□ 1.05
PTP4A3-206ENST00000524028 SKIV2LQ15477 1246 aaKnown RBP21.61■■□□□ 1.05
PTP4A3-206ENST00000524028 PLEKHG4Q58EX7 1191 aa21.61■■□□□ 1.05
PTP4A3-206ENST00000524028 NLRX1Q86UT6 975 aa21.61■■□□□ 1.05
PTP4A3-206ENST00000524028 LINC01553A4QN01 128 aa21.6■■□□□ 1.05
PTP4A3-206ENST00000524028 KCNA2P16389 499 aa21.6■■□□□ 1.05
PTP4A3-206ENST00000524028 SGMS1Q86VZ5 419 aa21.6■■□□□ 1.05
PTP4A3-206ENST00000524028 GDPD5Q8WTR4 605 aa21.6■■□□□ 1.05
PTP4A3-206ENST00000524028 MTUS1Q9ULD2 1270 aa21.6■■□□□ 1.05
PTP4A3-206ENST00000524028 CTSHP09668 335 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 KCNQ1P51787 676 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 ERVK-21P61565 698 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 BMP2KLQ5H9B9 411 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 MICU3Q86XE3 530 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 LMBR1Q8WVP7 490 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 GPRASP2Q96D09 838 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 UHRF1Q96T88 793 aaPredicted RBP21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 SUGCTQ9HAC7 445 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 UBIAD1Q9Y5Z9 338 aa21.59■■□□□ 1.05
PTP4A3-206ENST00000524028 GSTTP1A0A1W2PQM5 241 aa21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 TCF7P36402 384 aaPredicted RBP21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 ARHGAP4P98171 946 aa21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 GIMAP8Q8ND71 665 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms