RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 TMEM260Q9NX78 707 aa21.9■■□□□ 1.1
FBXO28-205ENST00000523990 GTF2IRD1Q9UHL9 959 aa21.9■■□□□ 1.1
FBXO28-205ENST00000523990 KAT6AQ92794 2004 aa21.9■■□□□ 1.1
FBXO28-205ENST00000523990 NOP56O00567 594 aaKnown RBP21.89■■□□□ 1.1
FBXO28-205ENST00000523990 ATP9AO75110 1047 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 AKAP17AQ02040 695 aaKnown RBP21.89■■□□□ 1.1
FBXO28-205ENST00000523990 MTMR1Q13613 665 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 PTGISQ16647 500 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 TMEM240Q5SV17 173 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 PSRC1Q6PGN9 363 aaPredicted RBP21.89■■□□□ 1.1
FBXO28-205ENST00000523990 CCDC12Q8WUD4 166 aaPredicted RBP21.89■■□□□ 1.1
FBXO28-205ENST00000523990 GPR20Q99678 358 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 ALG1Q9BT22 464 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 IL23AQ9NPF7 189 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 JADE2Q9NQC1 790 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 HDAC6Q9UBN7 1215 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 TELO2Q9Y4R8 837 aa21.89■■□□□ 1.1
FBXO28-205ENST00000523990 PITPNM1O00562 1244 aa21.89■■□□□ 1.09
FBXO28-205ENST00000523990 LGALS2P05162 132 aa21.89■■□□□ 1.09
FBXO28-205ENST00000523990 ACRP10323 421 aa21.89■■□□□ 1.09
FBXO28-205ENST00000523990 SREBF1P36956 1147 aa21.89■■□□□ 1.09
FBXO28-205ENST00000523990 C7orf31Q8N865 590 aa21.89■■□□□ 1.09
FBXO28-205ENST00000523990 GIMAP8Q8ND71 665 aaPredicted RBP21.89■■□□□ 1.09
FBXO28-205ENST00000523990 SCLYQ96I15 445 aa21.89■■□□□ 1.09
FBXO28-205ENST00000523990 NOD1Q9Y239 953 aa21.89■■□□□ 1.09
FBXO28-205ENST00000523990 TET1Q8NFU7 2136 aa21.88■■□□□ 1.09
FBXO28-205ENST00000523990 ADAMTS3O15072 1205 aa21.88■■□□□ 1.09
FBXO28-205ENST00000523990 EIF5BO60841 1220 aaKnown RBP21.88■■□□□ 1.09
FBXO28-205ENST00000523990 H3BRB1 525 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 MAFGO15525 162 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 SEC24BO95487 1268 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 STK3Q13188 491 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 RASIP1Q5U651 963 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 JAKMIP3Q5VZ66 844 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 CYP2W1Q8TAV3 490 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 VWCEQ96DN2 955 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 MXRA8Q9BRK3 442 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 TUT1Q9H6E5 874 aaKnown RBP21.87■■□□□ 1.09
FBXO28-205ENST00000523990 C6orf50Q9HD87 102 aa21.87■■□□□ 1.09
FBXO28-205ENST00000523990 CHD7Q9P2D1 2997 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 WDR81Q562E7 1941 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 SP4Q02446 784 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 ZNF365Q70YC5 407 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 TRIM22Q8IYM9 498 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 REXO1Q8N1G1 1221 aaKnown RBP21.86■■□□□ 1.09
FBXO28-205ENST00000523990 CCDC148Q8NFR7 591 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 CAGE1Q8TC20 777 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 CRYGNQ8WXF5 182 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 KCNH7Q9NS40 1196 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 PKD2L1Q9P0L9 805 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 VPS54Q9P1Q0 977 aa21.86■■□□□ 1.09
FBXO28-205ENST00000523990 PTPRSQ13332 1948 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 CPLX1O14810 134 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 GNA11P29992 359 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 SMAD3P84022 425 aaKnown RBP21.85■■□□□ 1.09
FBXO28-205ENST00000523990 ARHGAP4P98171 946 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 BFSP2Q13515 415 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 HIC1Q14526 733 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 CEP55Q53EZ4 464 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 Q7L0L9 218 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 TRIM50Q86XT4 487 aa21.85■■□□□ 1.09
FBXO28-205ENST00000523990 DHX38Q92620 1227 aaKnown RBP21.85■■□□□ 1.09
FBXO28-205ENST00000523990 HOXC8P31273 242 aa21.84■■□□□ 1.09
FBXO28-205ENST00000523990 SSRP1Q08945 709 aaKnown RBP21.84■■□□□ 1.09
FBXO28-205ENST00000523990 RBL2Q08999 1139 aa21.84■■□□□ 1.09
FBXO28-205ENST00000523990 SCRN1Q12765 414 aa21.84■■□□□ 1.09
FBXO28-205ENST00000523990 MCTP2Q6DN12 878 aa21.84■■□□□ 1.09
FBXO28-205ENST00000523990 DEFB123Q8N688 67 aa21.84■■□□□ 1.09
FBXO28-205ENST00000523990 CCDC155Q8N6L0 562 aa21.84■■□□□ 1.09
FBXO28-205ENST00000523990 SH3GLB2Q9NR46 395 aa21.84■■□□□ 1.09
FBXO28-205ENST00000523990 TPCN1Q9ULQ1 816 aa21.84■■□□□ 1.09
FBXO28-205ENST00000523990 DEXIO95424 95 aa21.83■■□□□ 1.09
FBXO28-205ENST00000523990 IQCF3P0C7M6 154 aa21.83■■□□□ 1.09
FBXO28-205ENST00000523990 TCF7P36402 384 aaPredicted RBP21.83■■□□□ 1.09
FBXO28-205ENST00000523990 AK2P54819 239 aa21.83■■□□□ 1.09
FBXO28-205ENST00000523990 RPUSD2Q8IZ73 545 aaKnown RBP21.83■■□□□ 1.09
FBXO28-205ENST00000523990 BICD2Q8TD16 824 aa21.83■■□□□ 1.09
FBXO28-205ENST00000523990 AFAP1L1Q8TED9 768 aa21.83■■□□□ 1.09
FBXO28-205ENST00000523990 HERVK_113Q902F9 699 aa21.83■■□□□ 1.09
FBXO28-205ENST00000523990 ZNF215Q9UL58 517 aaPredicted RBP21.83■■□□□ 1.09
FBXO28-205ENST00000523990 SIP14410 1827 aa21.83■■□□□ 1.08
FBXO28-205ENST00000523990 NFASCO94856 1347 aa21.83■■□□□ 1.08
FBXO28-205ENST00000523990 UNC80Q8N2C7 3258 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 MEIS1O00470 390 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 PFKMP08237 780 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 CYP3A4P08684 503 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 SMIM10L2AP0DMW4 78 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 SMIM10L2BP0DMW5 78 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 ARP10275 920 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 RFC2P35250 354 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 ZNF200P98182 395 aaPredicted RBP21.82■■□□□ 1.08
FBXO28-205ENST00000523990 PTK7Q13308 1070 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 UTP14CQ5TAP6 766 aaKnown RBP21.82■■□□□ 1.08
FBXO28-205ENST00000523990 FAM109BQ6ICB4 259 aaPredicted RBP21.82■■□□□ 1.08
FBXO28-205ENST00000523990 CPLX2Q6PUV4 134 aaKnown RBP21.82■■□□□ 1.08
FBXO28-205ENST00000523990 RETREG2Q8NC44 543 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 RASGRP4Q8TDF6 673 aa21.82■■□□□ 1.08
FBXO28-205ENST00000523990 JPH1Q9HDC5 661 aaPredicted RBP21.82■■□□□ 1.08
FBXO28-205ENST00000523990 PRUNE2Q8WUY3 3088 aa21.81■■□□□ 1.08
FBXO28-205ENST00000523990 IGLV3-22A0A075B6J6 115 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms