RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 USP11P51784 963 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 PSMC6P62333 389 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 TRIM29Q14134 588 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 KRT25Q7Z3Z0 450 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 PLA2G4DQ86XP0 818 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 CYP2W1Q8TAV3 490 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 BRMS1Q9HCU9 246 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 GJB4Q9NTQ9 266 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 PRKAG2Q9UGJ0 569 aa14.26□□□□□ -0.13
CCNC-216ENST00000523961 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
CCNC-216ENST00000523961 GRIN2DO15399 1336 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 FAM86B1E9PN63 330 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 TLR3O15455 904 aaKnown RBP14.25□□□□□ -0.13
CCNC-216ENST00000523961 ATP9AO75110 1047 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 CLTBP09497 229 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 FAM86B2P0C5J1 330 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 ARP10275 920 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 SETQ01105 290 aaPredicted RBP14.25□□□□□ -0.13
CCNC-216ENST00000523961 NONOQ15233 471 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCNC-216ENST00000523961 TBCKQ8TEA7 893 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 TMX3Q96JJ7 454 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 KATNAL1Q9BW62 490 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 BCAS3Q9H6U6 928 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 PKD2L1Q9P0L9 805 aa14.25□□□□□ -0.13
CCNC-216ENST00000523961 NFASCO94856 1347 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 MYH7BA7E2Y1 1941 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 IGLV3-22A0A075B6J6 115 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 CCDC194A0A1B0GVG4 234 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 CD2BP2O95400 341 aaKnown RBP14.24□□□□□ -0.13
CCNC-216ENST00000523961 F2P00734 622 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 SYN1P17600 705 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 KRT2P35908 639 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 NBPF20Q3BBV1 942 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 FAM126BQ8IXS8 530 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 FAM184AQ8NB25 1140 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 GPR20Q99678 358 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 SDF4Q9BRK5 362 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 AGO4Q9HCK5 861 aaKnown RBP14.24□□□□□ -0.13
CCNC-216ENST00000523961 PRDM5Q9NQX1 630 aaPredicted RBP14.24□□□□□ -0.13
CCNC-216ENST00000523961 PDLIM7Q9NR12 457 aa14.24□□□□□ -0.13
CCNC-216ENST00000523961 CEP290O15078 2479 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 MMP1P03956 469 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 ZNF286BP0CG31 522 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 CHMP4BP1P59074 171 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 SP4Q02446 784 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 PTPN11Q06124 597 aaPredicted RBP14.23□□□□□ -0.13
CCNC-216ENST00000523961 FAAP100Q0VG06 881 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 PRR16Q569H4 304 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 KRT40Q6A162 431 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 OXER1Q8TDS5 423 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 SEPT1Q8WYJ6 367 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 KAT2BQ92831 832 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 C8orf76Q96K31 380 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 JPH1Q9HDC5 661 aaPredicted RBP14.23□□□□□ -0.13
CCNC-216ENST00000523961 TMEM39AQ9NV64 488 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 SLC9A2Q9UBY0 812 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 KIF3AQ9Y496 699 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 SCN10AQ9Y5Y9 1956 aa14.23□□□□□ -0.13
CCNC-216ENST00000523961 HAS3O00219 553 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 IPO5O00410 1097 aaKnown RBP14.22□□□□□ -0.13
CCNC-216ENST00000523961 KIAA0355O15063 1070 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 EDIL3O43854 480 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 CD4P01730 458 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 LGALS2P05162 132 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 SUPT20HL2P0C7V6 817 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 PSEN2P49810 448 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 FOSBP53539 338 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 MFSD10Q14728 455 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 SAFBQ15424 915 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCNC-216ENST00000523961 INF2Q27J81 1249 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 MOXD1Q6UVY6 613 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 SH3RF1Q7Z6J0 888 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 LBHD1Q9BQE6 289 aaPredicted RBP14.22□□□□□ -0.13
CCNC-216ENST00000523961 ZNF577Q9BSK1 485 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 C16orf70Q9BSU1 422 aa14.22□□□□□ -0.13
CCNC-216ENST00000523961 CYP3A7-CYP3A51PA0A087WV96 503 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 TRIM43BA6NCK2 446 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 H3BRB1 525 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 B4GALT4O60513 344 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 CYP3A7P24462 503 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 TCF7P36402 384 aaPredicted RBP14.21□□□□□ -0.13
CCNC-216ENST00000523961 ITGB3BPQ13352 177 aaPredicted RBP14.21□□□□□ -0.13
CCNC-216ENST00000523961 KIAA0753Q2KHM9 967 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 UTP14CQ5TAP6 766 aaKnown RBP14.21□□□□□ -0.13
CCNC-216ENST00000523961 PIK3AP1Q6ZUJ8 805 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 NEK8Q86SG6 692 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 SESTD1Q86VW0 696 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 DIS3L2Q8IYB7 885 aaKnown RBP14.21□□□□□ -0.13
CCNC-216ENST00000523961 TRIM43Q96BQ3 446 aaPredicted RBP14.21□□□□□ -0.13
CCNC-216ENST00000523961 NAP1L4Q99733 375 aaKnown RBP14.21□□□□□ -0.13
CCNC-216ENST00000523961 TRPV6Q9H1D0 765 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 TUT1Q9H6E5 874 aaKnown RBP14.21□□□□□ -0.13
CCNC-216ENST00000523961 TBC1D22BQ9NU19 505 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 TCEAL9Q9UHQ7 104 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 TBX21Q9UL17 535 aa14.21□□□□□ -0.13
CCNC-216ENST00000523961 ZNF215Q9UL58 517 aaPredicted RBP14.21□□□□□ -0.13
CCNC-216ENST00000523961 GSTTP1A0A1W2PQM5 241 aa14.2□□□□□ -0.14
CCNC-216ENST00000523961 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms