RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 LRRTM3Q86VH5 581 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 RIOX2Q8IUF8 465 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 TEX2Q8IWB9 1127 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 TMEFF1Q8IYR6 380 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 PCDH19Q8TAB3 1148 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 PLEKHO2Q8TD55 490 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 KCNC2Q96PR1 638 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 RNF38Q9H0F5 515 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 SPC25Q9HBM1 224 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 CLDND1Q9NY35 253 aa5.48□□□□□ -1.53
PCM1-220ENST00000523896 FAM83GA6ND36 823 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 GSG1L2A8MUP6 293 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 PRRG2O14669 202 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 NPTXRO95502 500 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 FUCA1P04066 466 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 MYCLP1P12525 358 aaPredicted RBP5.47□□□□□ -1.53
PCM1-220ENST00000523896 NCAM1P13591 858 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 NCLP19338 710 aaKnown RBP5.47□□□□□ -1.53
PCM1-220ENST00000523896 LIMS1P48059 325 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 ZNF460Q14592 562 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 SLC9A5Q14940 896 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 VMACQ2NL98 169 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 MROH9Q5TGP6 573 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 THNSL2Q86YJ6 484 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 ZC3H7AQ8IWR0 971 aaKnown RBP5.47□□□□□ -1.53
PCM1-220ENST00000523896 PPM1KQ8N3J5 372 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 LINC01356Q8N9X3 169 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 NETO2Q8NC67 525 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 DDX1Q92499 740 aaKnown RBP5.47□□□□□ -1.53
PCM1-220ENST00000523896 TRMT2BQ96GJ1 504 aaKnown RBP5.47□□□□□ -1.53
PCM1-220ENST00000523896 CHAMP1Q96JM3 812 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 TARS2Q9BW92 718 aaKnown RBP5.47□□□□□ -1.53
PCM1-220ENST00000523896 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 IPPKQ9H8X2 491 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 BTG4Q9NY30 223 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 FBLN5Q9UBX5 448 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 PMF1-BGLAPU3KQ54 211 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 NCANO14594 1321 aa5.47□□□□□ -1.53
PCM1-220ENST00000523896 C22orf46C9J442 243 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 PDE8AO60658 829 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 ZBTB7AO95365 584 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 CKMP06732 381 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 GLI4P10075 376 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 KCNA6P17658 529 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 FLT3P36888 993 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 STAT3P40763 770 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 FAM47CQ5HY64 1035 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 WWC2Q6AWC2 1192 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 ZCCHC8Q6NZY4 707 aaKnown RBP5.46□□□□□ -1.54
PCM1-220ENST00000523896 CNNM4Q6P4Q7 775 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 KRT26Q7Z3Y9 468 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 FILIP1Q7Z7B0 1213 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 FBXW5Q969U6 566 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 CELF4Q9BZC1 486 aaKnown RBP5.46□□□□□ -1.54
PCM1-220ENST00000523896 EPB41L1Q9H4G0 881 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 LUC7LQ9NQ29 371 aaKnown RBP5.46□□□□□ -1.54
PCM1-220ENST00000523896 IFT57Q9NWB7 429 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 MAPRE3Q9UPY8 281 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 COA3Q9Y2R0 106 aaPredicted RBP5.46□□□□□ -1.54
PCM1-220ENST00000523896 IRS2Q9Y4H2 1338 aa5.46□□□□□ -1.54
PCM1-220ENST00000523896 GSTA4O15217 222 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 JMJD7P0C870 316 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 SYN1P17600 705 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 SLC6A11P48066 632 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 HABP4Q5JVS0 413 aaKnown RBP5.45□□□□□ -1.54
PCM1-220ENST00000523896 ABHD17CQ6PCB6 329 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 C16orf59Q7L2K0 433 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 RNF180Q86T96 592 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 DDX53Q86TM3 631 aaKnown RBP5.45□□□□□ -1.54
PCM1-220ENST00000523896 DCP2Q8IU60 420 aaKnown RBP5.45□□□□□ -1.54
PCM1-220ENST00000523896 CHAC2Q8WUX2 184 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 TSPAN17Q96FV3 270 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 BRINP2Q9C0B6 783 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 AP5M1Q9H0R1 490 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 CAAP1Q9H8G2 361 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 EPB41L4AQ9HCS5 686 aaPredicted RBP5.45□□□□□ -1.54
PCM1-220ENST00000523896 RTEL1Q9NZ71 1219 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 HCFC2Q9Y5Z7 792 aa5.45□□□□□ -1.54
PCM1-220ENST00000523896 CCDC66A2RUB6 948 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 DGKIO75912 1065 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 SRGAP2CP0DJJ0 459 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 SOX5P35711 763 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 KCNC1P48547 511 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 FOXO4P98177 505 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 CAP1Q01518 475 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 EMC4Q5J8M3 183 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 CDCA2Q69YH5 1023 aaPredicted RBP5.44□□□□□ -1.54
PCM1-220ENST00000523896 UBE2R2Q712K3 238 aaPredicted RBP5.44□□□□□ -1.54
PCM1-220ENST00000523896 ZDHHC14Q8IZN3 488 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 AHI1Q8N157 1196 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 IGSF22Q8N9C0 903 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 FEZF2Q8TBJ5 459 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 ORAI3Q9BRQ5 295 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 JAM3Q9BX67 310 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 SAMD15Q9P1V8 674 aa5.44□□□□□ -1.54
PCM1-220ENST00000523896 OTOL1A6NHN0 477 aaPredicted RBP5.43□□□□□ -1.54
PCM1-220ENST00000523896 KPNA6O60684 536 aa5.43□□□□□ -1.54
PCM1-220ENST00000523896 GLRX3O76003 335 aaKnown RBP5.43□□□□□ -1.54
PCM1-220ENST00000523896 NTRK1P04629 796 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms