RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 LTBP4Q8N2S1 1624 aa19.74■□□□□ 0.75
IKBKB-228ENST00000523517 GOLGA6BA6NDN3 693 aa19.74■□□□□ 0.75
IKBKB-228ENST00000523517 E9PMD0 336 aa19.74■□□□□ 0.75
IKBKB-228ENST00000523517 TLR2O60603 784 aa19.74■□□□□ 0.75
IKBKB-228ENST00000523517 PAFAH1B1P43034 410 aa19.74■□□□□ 0.75
IKBKB-228ENST00000523517 LRRC31Q6UY01 552 aa19.74■□□□□ 0.75
IKBKB-228ENST00000523517 KCTD1Q719H9 257 aa19.74■□□□□ 0.75
IKBKB-228ENST00000523517 LRRC4BQ9NT99 713 aa19.74■□□□□ 0.75
IKBKB-228ENST00000523517 BUB1O43683 1085 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 PLA2G4BP0C869 781 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 SND1Q7KZF4 910 aaKnown RBP eCLIP19.73■□□□□ 0.75
IKBKB-228ENST00000523517 TRIM59Q8IWR1 403 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 NELFCDQ8IXH7 590 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 CRAMP1Q96RY5 1269 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 USP40Q9NVE5 1235 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 EHD2Q9NZN4 543 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 TSKSQ9UJT2 592 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 RIMBP2O15034 1052 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 MARSP56192 900 aaKnown RBP19.73■□□□□ 0.75
IKBKB-228ENST00000523517 POLR2FP61218 127 aaKnown RBP19.73■□□□□ 0.75
IKBKB-228ENST00000523517 TSPYL1Q9H0U9 437 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 LCMT1Q9UIC8 334 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.73■□□□□ 0.75
IKBKB-228ENST00000523517 C10orf71Q711Q0 1435 aa19.73■□□□□ 0.75
IKBKB-228ENST00000523517 NPHP3-ACAD11A0A0J9YXS1 232 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 NAP1L1P55209 391 aaKnown RBP19.72■□□□□ 0.75
IKBKB-228ENST00000523517 MRPS25P82663 173 aaKnown RBP19.72■□□□□ 0.75
IKBKB-228ENST00000523517 SLC7A5Q01650 507 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 HAUS3Q68CZ6 603 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 FOXR1Q6PIV2 292 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 GPBP1Q86WP2 473 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 CERS5Q8N5B7 392 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 COA1Q9GZY4 146 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 ATP6V0A2Q9Y487 856 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 MPHOSPH10O00566 681 aaKnown RBP19.72■□□□□ 0.75
IKBKB-228ENST00000523517 HERC4Q5GLZ8 1057 aaPredicted RBP19.72■□□□□ 0.75
IKBKB-228ENST00000523517 SRLQ86TD4 932 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 SCFD1Q8WVM8 642 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 UIMC1Q96RL1 719 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 KCTD10Q9H3F6 313 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 STIM2Q9P246 746 aa19.72■□□□□ 0.75
IKBKB-228ENST00000523517 FEZ2Q9UHY8 353 aaPredicted RBP19.72■□□□□ 0.75
IKBKB-228ENST00000523517 POTEB3A0JP26 581 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 POTECB2RU33 542 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 SLC26A4O43511 780 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 CYP11B2P19099 503 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 CACNB1Q02641 598 aaPredicted RBP19.71■□□□□ 0.75
IKBKB-228ENST00000523517 POTEBQ6S5H4 581 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 TMC4Q7Z404 712 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 KCNMB3Q9NPA1 279 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 LUC7LQ9NQ29 371 aaKnown RBP19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L15C9J2P7 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L13C9JLJ4 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L11C9JVI0 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L18D6R9N7 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L22D6RA61 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L17D6RBQ6 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L19D6RCP7 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L20D6RJB6 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L24Q0WX57 530 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP17L6PQ6QN14 398 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 ZC3H3Q8IXZ2 948 aaKnown RBP19.71■□□□□ 0.75
IKBKB-228ENST00000523517 GLT8D2Q9H1C3 349 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 EMILIN3Q9NT22 766 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 RBM12Q9NTZ6 932 aaKnown RBP19.71■□□□□ 0.75
IKBKB-228ENST00000523517 RNF14Q9UBS8 474 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 USP21Q9UK80 565 aa19.71■□□□□ 0.75
IKBKB-228ENST00000523517 RRP15Q9Y3B9 282 aaKnown RBP19.71■□□□□ 0.75
IKBKB-228ENST00000523517 MYO1CO00159 1063 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 USP11P51784 963 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 APBA1Q02410 837 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 NAB2Q15742 525 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 CFAP221Q4G0U5 840 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.7■□□□□ 0.74
IKBKB-228ENST00000523517 SP8Q8IXZ3 490 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 KANSL2Q9H9L4 492 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 EPHB4P54760 987 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 GLE1Q53GS7 698 aaKnown RBP19.7■□□□□ 0.74
IKBKB-228ENST00000523517 EMBQ6PCB8 327 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 TBC1D5Q92609 795 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 MS4A14Q96JA4 679 aa19.7■□□□□ 0.74
IKBKB-228ENST00000523517 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 GOLGA6CA6NDK9 693 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 PPEF1O14829 653 aaPredicted RBP19.69■□□□□ 0.74
IKBKB-228ENST00000523517 PALMO75781 387 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 HLA-DOAP06340 250 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 GOLGA6DP0CG33 693 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 TNFRSF8P28908 595 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 ADAM9Q13443 819 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 SLC18A3Q16572 532 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 QRICH1Q2TAL8 776 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 CDC42EP5Q6NZY7 148 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 C8orf74Q6P047 294 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 FAM76AQ8TAV0 307 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 MXD3Q9BW11 206 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 GOLGA6AQ9NYA3 693 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 CYP3A7-CYP3A51PA0A087WV96 503 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 FRMD3A2A2Y4 597 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 TOM1O60784 492 aa19.69■□□□□ 0.74
IKBKB-228ENST00000523517 MED24O75448 989 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms