RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 THAP9Q9H5L6 903 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 TMEM191BP0C7N4 346 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 PSMD2Q13200 908 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 PRPF38AQ8NAV1 312 aaKnown RBP14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 ACCSQ96QU6 501 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 SELENOSQ9BQE4 189 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 MAK16Q9BXY0 300 aaKnown RBP14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 FEM1BQ9UK73 627 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 SARM1Q6SZW1 724 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 ZNF365Q70YC5 407 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 FAM184BQ9ULE4 1060 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 SHPRHQ149N8 1683 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 ATP2C2O75185 946 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 OSBPP22059 807 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 PPARDQ03181 441 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 TSKSQ9UJT2 592 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 DPEP1P16444 411 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 SND1Q7KZF4 910 aaKnown RBP eCLIP14.31□□□□□ -0.122e-7■■■■■ 27.3
PCDHGB1-201ENST00000523390 PTF1AQ7RTS3 328 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 SFR1Q86XK3 245 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 SLC10A4Q96EP9 437 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 ASIC3Q9UHC3 531 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 CNTNAP5Q8WYK1 1306 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 WTIPA6NIX2 430 aaPredicted RBP14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 PDHBP11177 359 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 LRRC63Q05C16 580 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 MTMR1Q13613 665 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 MIS18BP1Q6P0N0 1132 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 MICALL2Q8IY33 904 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 ADPGKQ9BRR6 497 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 SPTLC3Q9NUV7 552 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 HYOU1Q9Y4L1 999 aa14.31□□□□□ -0.12
PCDHGB1-201ENST00000523390 M0QZ92 97 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 PSMD14O00487 310 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 KIF4AO95239 1232 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 PPP4CP60510 307 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 DMTNQ08495 405 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 IFT20Q8IY31 132 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 CAMTA1Q9Y6Y1 1673 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 TMOD1P28289 359 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 ZBED6P86452 979 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 NFIAQ12857 509 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 PPP2R5AQ15172 486 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 ADAT2Q7Z6V5 191 aaKnown RBP14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 FAM133AQ8N9E0 248 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 FAM20AQ96MK3 541 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 SPC25Q9HBM1 224 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 GOLGA8IPA6NC78 632 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 GOLGA8JA6NMD2 632 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 PEX3P56589 373 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 EHHADHQ08426 723 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 WHAMMP3Q1A5X7 153 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 CCDC144BQ3MJ40 725 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 RAD54LQ92698 747 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 NT5C1BQ96P26 610 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 GCNT4Q9P109 453 aa14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
PCDHGB1-201ENST00000523390 ACTN4O43707 911 aaKnown RBP14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 PRAMEF18Q5VWM3 479 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 CCDC105Q8IYK2 499 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 DYDC2Q96IM9 177 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 ZNF70Q9UC06 446 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 TNNC2P02585 160 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 MARK3P27448 753 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 RSBN1LQ6PCB5 846 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 IQCGQ9H095 443 aaKnown RBP14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 UTP11Q9Y3A2 253 aaKnown RBP14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 EIF4A3P38919 411 aaKnown RBP14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 PDE6CP51160 858 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 HMGCS2P54868 508 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 MICALCLQ6ZW33 695 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 MMS19Q96T76 1030 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 CALCOCO1Q9P1Z2 691 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 ENTPD3O75355 529 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 MB21D1Q8N884 522 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 PPP1R14CQ8TAE6 165 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 RSPH14Q9UHP6 348 aa14.29□□□□□ -0.12
PCDHGB1-201ENST00000523390 GFPT2O94808 682 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 PSAPP07602 524 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 PRELPP51888 382 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 YARSP54577 528 aaKnown RBP14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 GRIN1Q05586 938 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 LONRF2Q1L5Z9 754 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 STYK1Q6J9G0 422 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 PPP1R16BQ96T49 567 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 AKT3Q9Y243 479 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 IFT172Q9UG01 1749 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 TEX33O43247 280 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 HPDP32754 393 aaPredicted RBP14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 PIK3CAP42336 1068 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 COASYQ13057 564 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 APOL6Q9BWW8 343 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 TMEM39BQ9GZU3 492 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 TMEM206Q9H813 350 aa14.28□□□□□ -0.12
PCDHGB1-201ENST00000523390 TCP1P17987 556 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms