RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 CRACR2AQ9BSW2 395 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 NUCKS1Q9H1E3 243 aaKnown RBP4.3□□□□□ -1.72
HDAC2-215ENST00000523334 NDST4Q9H3R1 872 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 NLRC4Q9NPP4 1024 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 CD2APQ9Y5K6 639 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 TIAM2Q8IVF5 1701 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 LAMB2P55268 1798 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 ARAP2Q8WZ64 1704 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 MYH6P13533 1939 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 CHD4Q14839 1912 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 A0A1W2PRG0 241 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 IPO5O00410 1097 aaKnown RBP4.3□□□□□ -1.72
HDAC2-215ENST00000523334 EXOC3O60645 756 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC172P0C7W6 258 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 XRCC5P13010 732 aaKnown RBP4.3□□□□□ -1.72
HDAC2-215ENST00000523334 RPA1P27694 616 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 MATR3P43243 847 aaKnown RBP eCLIP4.3□□□□□ -1.72
HDAC2-215ENST00000523334 PRELPP51888 382 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 ZBED6P86452 979 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 PPP2R3AQ06190 1150 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 SHROOM1Q2M3G4 852 aaPredicted RBP4.3□□□□□ -1.72
HDAC2-215ENST00000523334 SLC9C1Q4G0N8 1177 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 NAALADL2Q58DX5 795 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 ANGEL2Q5VTE6 544 aaKnown RBP4.3□□□□□ -1.72
HDAC2-215ENST00000523334 CDKAL1Q5VV42 579 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 ANKRD40Q6AI12 368 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 TMCO3Q6UWJ1 677 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 PPP4R3CPQ6ZMV5 832 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 RNF207Q6ZRF8 634 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 PIGOQ8TEQ8 1089 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 MTMR9Q96QG7 549 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 RMDN3Q96TC7 470 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 PDCL3Q9H2J4 239 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 SPON1Q9HCB6 807 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 RNF146Q9NTX7 359 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 HACL1Q9UJ83 578 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 ZNF831Q5JPB2 1677 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 RREB1Q92766 1687 aa4.3□□□□□ -1.72
HDAC2-215ENST00000523334 A0A1W2PQC6 194 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 SOWAHDA6NJG2 315 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC169A6NNP5 214 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 USP27XA6NNY8 438 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 PAFAH1B1P43034 410 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 MAGEA1P43355 309 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 MTMR2Q13614 643 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 VWA3BQ502W6 1294 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 E4F1Q66K89 784 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 ANKRD35Q8N283 1001 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 TSC1Q92574 1164 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 TAF4BQ92750 862 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 BICD1Q96G01 975 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 IWS1Q96ST2 819 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 EIF2AK1Q9BQI3 630 aaKnown RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 RPAP3Q9H6T3 665 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 PARVGQ9HBI0 331 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 JADE2Q9NQC1 790 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 RGL1Q9NZL6 768 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 ZNF215Q9UL58 517 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 FAM184BQ9ULE4 1060 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 ADAMTS3O15072 1205 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 TBC1D12O60347 775 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 EYA4O95677 639 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 INPP5BP32019 993 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 USP8P40818 1118 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 HMGCS2P54868 508 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 XKR9Q5GH70 373 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 BTNL9Q6UXG8 535 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 SFR1Q86XK3 245 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CEP112Q8N8E3 955 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 TC2NQ8N9U0 490 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 ZNF280CQ8ND82 737 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 GOLGA5Q8TBA6 731 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 NEK9Q8TD19 979 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 TBC1D5Q92609 795 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 JAKMIP2Q96AA8 810 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CDHR1Q96JP9 859 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 AGBL1Q96MI9 1066 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CEP63Q96MT8 703 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 NAPGQ99747 312 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CARD6Q9BX69 1037 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 HAUS4Q9H6D7 363 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 GGA3Q9NZ52 723 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 TTC26A0AVF1 554 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CTAGE15A4D2H0 777 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 M0R2N6 131 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 MSH4O15457 936 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 PPP1R11O60927 126 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 PRPF6O94906 941 aaKnown RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CTAGE8P0CG41 777 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 NOP2P46087 812 aaKnown RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 MTMR1Q13613 665 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 TUBB2AQ13885 445 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 EPHA7Q15375 998 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 SFMBT2Q5VUG0 894 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 PRAMEF18Q5VWM3 479 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 SNRNP48Q6IEG0 339 aaKnown RBP4.29□□□□□ -1.72
HDAC2-215ENST00000523334 TTI2Q6NXR4 508 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 OTUD6AQ7L8S5 288 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CTAGE6Q86UF2 777 aa4.29□□□□□ -1.72
HDAC2-215ENST00000523334 CTAGE4Q8IX94 777 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms