RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 UTP14CQ5TAP6 766 aaKnown RBP23.78■■□□□ 1.4
SDCBP-209ENST00000522243 WWC2Q6AWC2 1192 aa23.78■■□□□ 1.4
SDCBP-209ENST00000522243 XRRA1Q6P2D8 792 aa23.78■■□□□ 1.4
SDCBP-209ENST00000522243 GPR20Q99678 358 aa23.78■■□□□ 1.4
SDCBP-209ENST00000522243 PCDHA6Q9UN73 950 aa23.78■■□□□ 1.4
SDCBP-209ENST00000522243 PCDHA8Q9Y5H6 950 aa23.78■■□□□ 1.4
SDCBP-209ENST00000522243 PTPRSQ13332 1948 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 SPDYE3A6NKU9 549 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 GOLGA8AA7E2F4 631 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 GOLGA8BA8MQT2 603 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 NBNO60934 754 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 RBL2Q08999 1139 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 ZNF618Q5T7W0 954 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 PPP2R2DQ66LE6 453 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 TRIM50Q86XT4 487 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 USP38Q8NB14 1042 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 SLC9A7Q96T83 725 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 PKD2L1Q9P0L9 805 aa23.77■■□□□ 1.4
SDCBP-209ENST00000522243 C17orf102A2RUQ5 167 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 ATP9AO75110 1047 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 SMIM10L2AP0DMW4 78 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 SMIM10L2BP0DMW5 78 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 CDC27P30260 824 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 NAPAP54920 295 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 FGD1P98174 961 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 TYW1BQ6NUM6 668 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 PPM1EQ8WY54 764 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 ATP6V0A1Q93050 837 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 USP26Q9BXU7 913 aa23.76■■□□□ 1.39
SDCBP-209ENST00000522243 V9GY48 417 aaPredicted RBP23.76■■□□□ 1.39
SDCBP-209ENST00000522243 ITGB5P18084 799 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 FUT2Q10981 343 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 ADGRE1Q14246 886 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 TCTN1Q2MV58 587 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 TRAF7Q6Q0C0 670 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 GPRASP2Q96D09 838 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 PGBD1Q96JS3 809 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 JAKMIP1Q96N16 626 aaKnown RBP23.75■■□□□ 1.39
SDCBP-209ENST00000522243 SENP7Q9BQF6 1050 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 RNPEPQ9H4A4 650 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 FAM217BQ9NTX9 383 aaPredicted RBP23.75■■□□□ 1.39
SDCBP-209ENST00000522243 UBIAD1Q9Y5Z9 338 aa23.75■■□□□ 1.39
SDCBP-209ENST00000522243 MYO9BQ13459 2157 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 TREHO43280 583 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 BAIAP3O94812 1187 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 CA3P07451 260 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 HMGB1P09429 215 aaKnown RBP23.74■■□□□ 1.39
SDCBP-209ENST00000522243 IGFBP4P22692 258 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 HSPA4P34932 840 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 THPOP40225 353 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 APOBRQ0VD83 1088 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 Q6ZUG5 572 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 KCNB2Q92953 911 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 SNX14Q9Y5W7 946 aa23.74■■□□□ 1.39
SDCBP-209ENST00000522243 PARNO95453 639 aaKnown RBP23.73■■□□□ 1.39
SDCBP-209ENST00000522243 CXCL10P02778 98 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 KCNA2P16389 499 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 KCNJ6P48051 423 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 CNKSR3Q6P9H4 555 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 TMCO2Q7Z6W1 182 aaPredicted RBP23.73■■□□□ 1.39
SDCBP-209ENST00000522243 SERINC5Q86VE9 423 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 HERC6Q8IVU3 1022 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 PHOSPHO2Q8TCD6 241 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 CERS4Q9HA82 394 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 SETD4Q9NVD3 440 aa23.73■■□□□ 1.39
SDCBP-209ENST00000522243 ADD1P35611 737 aaKnown RBP23.72■■□□□ 1.39
SDCBP-209ENST00000522243 TCF7P36402 384 aaPredicted RBP23.72■■□□□ 1.39
SDCBP-209ENST00000522243 WDR5P61964 334 aaKnown RBP23.72■■□□□ 1.39
SDCBP-209ENST00000522243 MTMR1Q13613 665 aa23.72■■□□□ 1.39
SDCBP-209ENST00000522243 MBTPS1Q14703 1052 aa23.72■■□□□ 1.39
SDCBP-209ENST00000522243 GIMAP8Q8ND71 665 aaPredicted RBP23.72■■□□□ 1.39
SDCBP-209ENST00000522243 CDHR1Q96JP9 859 aa23.72■■□□□ 1.39
SDCBP-209ENST00000522243 COL25A1Q9BXS0 654 aaPredicted RBP23.72■■□□□ 1.39
SDCBP-209ENST00000522243 RIC8AQ9NPQ8 531 aa23.72■■□□□ 1.39
SDCBP-209ENST00000522243 STXBP3O00186 592 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 ARHGEF15O94989 841 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 HOXC8P31273 242 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 METAP2P50579 478 aaKnown RBP eCLIP23.71■■□□□ 1.39
SDCBP-209ENST00000522243 DEFB103AP81534 67 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 CCDC85BQ15834 202 aaPredicted RBP23.71■■□□□ 1.39
SDCBP-209ENST00000522243 BLOC1S2Q6QNY1 142 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 BRF1Q92994 677 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 EHMT1Q9H9B1 1298 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 JADE2Q9NQC1 790 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 PRDM6Q9NQX0 595 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 TMEM260Q9NX78 707 aa23.71■■□□□ 1.39
SDCBP-209ENST00000522243 ZNF215Q9UL58 517 aaPredicted RBP23.71■■□□□ 1.39
SDCBP-209ENST00000522243 GSTTP1A0A1W2PQM5 241 aa23.7■■□□□ 1.38
SDCBP-209ENST00000522243 SMCO2A6NFE2 343 aa23.7■■□□□ 1.38
SDCBP-209ENST00000522243 RSPH10B2B2RC85 870 aa23.7■■□□□ 1.38
SDCBP-209ENST00000522243 KIF28PB7ZC32 967 aa23.7■■□□□ 1.38
SDCBP-209ENST00000522243 RFXAPO00287 272 aa23.7■■□□□ 1.38
SDCBP-209ENST00000522243 RSPH10BP0C881 870 aa23.7■■□□□ 1.38
SDCBP-209ENST00000522243 ADCY7P51828 1080 aa23.7■■□□□ 1.38
SDCBP-209ENST00000522243 KAT6AQ92794 2004 aa23.7■■□□□ 1.38
SDCBP-209ENST00000522243 CTSHP09668 335 aa23.69■■□□□ 1.38
SDCBP-209ENST00000522243 ARHGAP4P98171 946 aa23.69■■□□□ 1.38
SDCBP-209ENST00000522243 PPP1R18Q6NYC8 613 aa23.69■■□□□ 1.38
SDCBP-209ENST00000522243 CYP2W1Q8TAV3 490 aa23.69■■□□□ 1.38
SDCBP-209ENST00000522243 SEPT1Q8WYJ6 367 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms