RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PSMD10O75832 226 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 ICAM3P32942 547 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 NDUFA8P51970 172 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 PDE4DQ08499 809 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 MORN1Q5T089 497 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 FMR1NBQ8N0W7 255 aaPredicted RBP14.72□□□□□ -0.05
CPNE3-205ENST00000522240 MSL3Q8N5Y2 521 aaKnown RBP14.72□□□□□ -0.05
CPNE3-205ENST00000522240 ZNF577Q9BSK1 485 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 AGO4Q9HCK5 861 aaKnown RBP14.72□□□□□ -0.05
CPNE3-205ENST00000522240 KCNH7Q9NS40 1196 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 WDR70Q9NW82 654 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 IPO5O00410 1097 aaKnown RBP14.71□□□□□ -0.05
CPNE3-205ENST00000522240 MAP3K13O43283 966 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 COBLO75128 1261 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 NR1I2O75469 434 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 HOXC6P09630 235 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 ARP10275 920 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 TECP42680 631 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 SYKP43405 635 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 FCGRTP55899 365 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 SPIRE1Q08AE8 756 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 MAP2K5Q13163 448 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 PPP2R5CQ13362 524 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 SNW1Q13573 536 aaKnown RBP14.71□□□□□ -0.05
CPNE3-205ENST00000522240 LRCH2Q5VUJ6 765 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 MAMDC4Q6UXC1 1216 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 KIF12Q96FN5 646 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 TEKT3Q9BXF9 490 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 MFRPQ9BY79 579 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 TBC1D22BQ9NU19 505 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 DACT1Q9NYF0 836 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 LRWD1Q9UFC0 647 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 VAV3Q9UKW4 847 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 KCNH3Q9ULD8 1083 aa14.71□□□□□ -0.05
CPNE3-205ENST00000522240 NFASCO94856 1347 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 SYNGAP1Q96PV0 1343 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 KDM3AQ9Y4C1 1321 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 POTEMA6NI47 508 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 TNPO2O14787 897 aaKnown RBP14.7□□□□□ -0.06
CPNE3-205ENST00000522240 GAS7O60861 476 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 KINO60870 393 aaKnown RBP14.7□□□□□ -0.06
CPNE3-205ENST00000522240 RGS20O76081 388 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 UBA7P41226 1012 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 LACTBP83111 547 aaPredicted RBP14.7□□□□□ -0.06
CPNE3-205ENST00000522240 SEMA3FQ13275 785 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 IRF5Q13568 498 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 SPECC1Q5M775 1068 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 CCDC183Q5T5S1 534 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 HAUS3Q68CZ6 603 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 CAVIN1Q6NZI2 390 aaKnown RBP14.7□□□□□ -0.06
CPNE3-205ENST00000522240 B3GNT9Q6UX72 402 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 DPP9Q86TI2 863 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 USP6NLQ92738 828 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 EPSTI1Q96J88 318 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 MAML3Q96JK9 1138 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 TIGD1Q96MW7 591 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 APBA2Q99767 749 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 NUDT12Q9BQG2 462 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 RNF186Q9NXI6 227 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 USP25Q9UHP3 1055 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 TCEAL9Q9UHQ7 104 aa14.7□□□□□ -0.06
CPNE3-205ENST00000522240 SPATA31C2B4DYI2 1134 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 KCNA2P16389 499 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 RGS2P41220 211 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 ITGB3BPQ13352 177 aaPredicted RBP14.69□□□□□ -0.06
CPNE3-205ENST00000522240 HYIQ5T013 277 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 KRT79Q5XKE5 535 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 KCNV1Q6PIU1 500 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 USP49Q70CQ1 688 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 ARMCX2Q7L311 632 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 CABP7Q86V35 215 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 ERMNQ8TAM6 284 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 NUP62CLQ9H1M0 184 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 CLSTN2Q9H4D0 955 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 VTA1Q9NP79 307 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 DISC1Q9NRI5 854 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 CCDC39Q9UFE4 941 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 ZSWIM8A7E2V4 1837 aa14.69□□□□□ -0.06
CPNE3-205ENST00000522240 MCM3APO60318 1980 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 PP2D1A8MPX8 630 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 DHX15O43143 795 aaKnown RBP14.68□□□□□ -0.06
CPNE3-205ENST00000522240 ZNF202O95125 648 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 TGFB3P10600 412 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 KRT76Q01546 638 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 SP3Q02447 781 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 OTOP1Q7RTM1 612 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 ELOA2Q8IYF1 753 aaPredicted RBP14.68□□□□□ -0.06
CPNE3-205ENST00000522240 KCTD17Q8N5Z5 321 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 RDM1Q8NG50 284 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 NEK9Q8TD19 979 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 SNX29Q8TEQ0 813 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 GJA10Q969M2 543 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 CALML4Q96GE6 196 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 CCDC34Q96HJ3 373 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 SENP7Q9BQF6 1050 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 ANP32EQ9BTT0 268 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 MMTAG2Q9BU76 263 aaKnown RBP14.68□□□□□ -0.06
CPNE3-205ENST00000522240 CUEDC2Q9H467 287 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 MAGEF1Q9HAY2 307 aa14.68□□□□□ -0.06
CPNE3-205ENST00000522240 TMEM63CQ9P1W3 806 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms