RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 CCDC66A2RUB6 948 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 MYO1BO43795 1136 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 PSPNO60542 156 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 RAB11FIP3O75154 756 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 PRNPP04156 253 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 KRT15P19012 456 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 SDHBP21912 280 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 FUT4P22083 530 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 GRK2P25098 689 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 GRK3P35626 688 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 SOX5P35711 763 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 RTP1P59025 263 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 MVKQ03426 396 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 LSAMPQ13449 338 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 PLCL1Q15111 1095 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 KIZQ2M2Z5 673 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 HLA-DQA1Q5Y7H0 255 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 IQCEQ6IPM2 695 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 INTS5Q6P9B9 1019 aaKnown RBP3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 RSPO2Q6UXX9 243 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 SLC51AQ86UW1 340 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 VSIG10LQ86VR7 867 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 DTX1Q86Y01 620 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 RBM12BQ8IXT5 1001 aaKnown RBP3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 STK11IPQ8N1F8 1099 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 AFAP1L2Q8N4X5 818 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 NUP43Q8NFH3 380 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 ATL2Q8NHH9 583 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 ZCRB1Q8TBF4 217 aaKnown RBP3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 WNK4Q96J92 1243 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 ZFYVE21Q9BQ24 234 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 ALG1Q9BT22 464 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 MTA3Q9BTC8 594 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 SP110Q9HB58 689 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 CATSPERZQ9NTU4 200 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 MBNL3Q9NUK0 354 aaKnown RBP3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 LMCD1Q9NZU5 365 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 H2AFY2Q9P0M6 372 aaPredicted RBP3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 TNFRSF10DQ9UBN6 386 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 MAPRE3Q9UPY8 281 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 ATP8A1Q9Y2Q0 1164 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 SIT1Q9Y3P8 196 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 ABCA9Q8IUA7 1624 aa3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 CFAP65Q6ZU64 1925 aaKnown RBP3.62□□□□□ -1.83
CKS1BP7-201ENST00000522230 ATP7AQ04656 1500 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 ZFYVE16Q7Z3T8 1539 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 FAM135AQ9P2D6 1515 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TRBV23OR9-2A0A075B6M9 112 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TCRBV5S4A2TA0A5A2 114 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 KIAA1324LA8MWY0 1029 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 C22orf46C9J442 243 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 CBX4O00257 560 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TRAF5O00463 557 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 NEMP1O14524 444 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 NKRFO15226 690 aaKnown RBP eCLIP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 KRT37O76014 449 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 RNASE1P07998 156 aaKnown RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 PRKCAP17252 672 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 POU3F2P20265 443 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 CDK11BP21127 795 aaKnown RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 JAM2P57087 298 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 SLC14A2Q15849 920 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TMEM177Q53S58 311 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 DDX46Q7L014 1031 aaKnown RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 OVCH1Q7RTY7 1134 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 DDX53Q86TM3 631 aaKnown RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 OSTM1Q86WC4 334 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TP53INP2Q8IXH6 220 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 PPM1KQ8N3J5 372 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 PIP4K2CQ8TBX8 421 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 PI4K2BQ8TCG2 481 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 PLEKHO2Q8TD55 490 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 COG1Q8WTW3 980 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 SYTL4Q96C24 671 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TRMT2BQ96GJ1 504 aaKnown RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TMEM169Q96HH4 297 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 GPR101Q96P66 508 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 BRINP2Q9C0B6 783 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 PCMTD2Q9NV79 361 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 DDX56Q9NY93 547 aaKnown RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 KLHL42Q9P2K6 505 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 ANGEL1Q9UNK9 670 aaKnown RBP3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TAF6LQ9Y6J9 622 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 YEATS2Q9ULM3 1422 aa3.61□□□□□ -1.83
CKS1BP7-201ENST00000522230 TEX14Q8IWB6 1497 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 DUOX2Q9NRD8 1548 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 UGGT1Q9NYU2 1555 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 MAST1Q9Y2H9 1570 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 A0A1W2PQ27 194 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 A0A1W2PQ45 241 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 A0A1W2PQ64 194 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 A0A1W2PQC6 194 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 A0A1W2PQD8 194 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 A0A1W2PQY0 241 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 FAM47E-STBD1D6RA91 191 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 KATNA1O75449 491 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 EYA4O95677 639 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 NTRK1P04629 796 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 AMY2AP04746 511 aa3.6□□□□□ -1.83
CKS1BP7-201ENST00000522230 PDE6AP16499 860 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms