RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 TRIM22Q8IYM9 498 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 NSUN7Q8NE18 718 aaKnown RBP9.62□□□□□ -0.87
VPS13B-210ENST00000521932 SMARCC2Q8TAQ2 1214 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 CD99L2Q8TCZ2 262 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 CLEC4DQ8WXI8 215 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 USP6NLQ92738 828 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 COA7Q96BR5 231 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 INSM2Q96T92 566 aaPredicted RBP9.62□□□□□ -0.87
VPS13B-210ENST00000521932 ARHGAP39Q9C0H5 1083 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 ACAD9Q9H845 621 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 BARHL2Q9NY43 387 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 MAP3K20Q9NYL2 800 aaKnown RBP9.62□□□□□ -0.87
VPS13B-210ENST00000521932 GJD2Q9UKL4 321 aa9.62□□□□□ -0.87
VPS13B-210ENST00000521932 MRPL11Q9Y3B7 192 aaKnown RBP9.62□□□□□ -0.87
VPS13B-210ENST00000521932 STK36Q9NRP7 1315 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 hCG_1642624A0A1W2PR95 340 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 SLC15A5A6NIM6 579 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 K7ELQ4 463 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-210ENST00000521932 TNPO2O14787 897 aaKnown RBP9.61□□□□□ -0.87
VPS13B-210ENST00000521932 OPLAHO14841 1288 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 DEXIO95424 95 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 ADH1AP07327 375 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 FCER1AP12319 257 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 SCG2P13521 617 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 FDPSP14324 419 aaKnown RBP9.61□□□□□ -0.87
VPS13B-210ENST00000521932 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-210ENST00000521932 HOXD10P28358 340 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 INSM1Q01101 510 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-210ENST00000521932 AKAP17AQ02040 695 aaKnown RBP9.61□□□□□ -0.87
VPS13B-210ENST00000521932 USH1GQ495M9 461 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 MCF2L2Q86YR7 1114 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 TEX2Q8IWB9 1127 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 CCDC83Q8IWF9 413 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-210ENST00000521932 PIBF1Q8WXW3 757 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 SLC26A6Q9BXS9 759 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 PRDM10Q9NQV6 1147 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 SH3GLB2Q9NR46 395 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 RNF146Q9NTX7 359 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 IVNS1ABPQ9Y6Y0 642 aa9.61□□□□□ -0.87
VPS13B-210ENST00000521932 DNAJC25-GNG10A0A024R161 153 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 PTPDC1A2A3K4 754 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 STXBP3O00186 592 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 NFIBO00712 420 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 PPFIA3O75145 1194 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 HOXC6P09630 235 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 XRCC5P13010 732 aaKnown RBP9.6□□□□□ -0.87
VPS13B-210ENST00000521932 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
VPS13B-210ENST00000521932 HSD17B4P51659 736 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 PRMT2P55345 433 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 IRF5Q13568 498 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 KCTD2Q14681 263 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 WWC2Q6AWC2 1192 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 OTOP1Q7RTM1 612 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 HEATR3Q7Z4Q2 680 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 ANKRD35Q8N283 1001 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 SOCS4Q8WXH5 440 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 IRF7Q92985 503 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 INTS4Q96HW7 963 aaKnown RBP9.6□□□□□ -0.87
VPS13B-210ENST00000521932 ZMYND12Q9H0C1 365 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 A1CFQ9NQ94 594 aaKnown RBP9.6□□□□□ -0.87
VPS13B-210ENST00000521932 HOMER2Q9NSB8 354 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 CYP39A1Q9NYL5 469 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 SRRDQ9UH36 339 aa9.6□□□□□ -0.87
VPS13B-210ENST00000521932 DIS3Q9Y2L1 958 aaKnown RBP9.6□□□□□ -0.87
VPS13B-210ENST00000521932 BAZ2BQ9UIF8 2168 aaKnown RBP9.6□□□□□ -0.87
VPS13B-210ENST00000521932 PFASO15067 1338 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 ESYT2A0FGR8 921 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 PIK3CDO00329 1044 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 MEIS2O14770 477 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 JAK2O60674 1132 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 COBLO75128 1261 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 IGHA2P01877 340 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 VSIG8P0DPA2 414 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 ADORA2AP29274 412 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 HMGN5P82970 282 aaKnown RBP9.59□□□□□ -0.87
VPS13B-210ENST00000521932 ZNF792Q3KQV3 632 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 WDR78Q5VTH9 848 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 FOXD4L5Q5VV16 416 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-210ENST00000521932 RNF207Q6ZRF8 634 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 CCDC12Q8WUD4 166 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-210ENST00000521932 WASF1Q92558 559 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 TBC1D5Q92609 795 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 DDX11Q96FC9 970 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 MMP19Q99542 508 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 PSTPIP2Q9H939 334 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 ORC3Q9UBD5 711 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-210ENST00000521932 GABRQQ9UN88 632 aa9.59□□□□□ -0.87
VPS13B-210ENST00000521932 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-210ENST00000521932 SMCHD1A6NHR9 2005 aa9.58□□□□□ -0.88
VPS13B-210ENST00000521932 SMCO2A6NFE2 343 aa9.58□□□□□ -0.88
VPS13B-210ENST00000521932 CFBP00751 764 aa9.58□□□□□ -0.88
VPS13B-210ENST00000521932 SCTRP47872 440 aa9.58□□□□□ -0.88
VPS13B-210ENST00000521932 FLT3LGP49771 235 aa9.58□□□□□ -0.88
VPS13B-210ENST00000521932 NAPAP54920 295 aa9.58□□□□□ -0.88
VPS13B-210ENST00000521932 RPS6P62753 249 aaKnown RBP9.58□□□□□ -0.88
VPS13B-210ENST00000521932 PTSQ03393 145 aa9.58□□□□□ -0.88
VPS13B-210ENST00000521932 PRKCZQ05513 592 aa9.58□□□□□ -0.88
VPS13B-210ENST00000521932 BAATQ14032 418 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms