RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 KIAA1217Q5T5P2 1943 aa13.02□□□□□ -0.32
CSMD1-210ENST00000521646 DEFB103AP81534 67 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 ARHGAP1Q07960 439 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 FOXC1Q12948 553 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 LY6KQ17RY6 165 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 USH1GQ495M9 461 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 GDF6Q6KF10 455 aaPredicted RBP13.02□□□□□ -0.33
CSMD1-210ENST00000521646 TRIM67Q6ZTA4 783 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 EVI5LQ96CN4 794 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 TAAR1Q96RJ0 339 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 MTG1Q9BT17 334 aaPredicted RBP13.02□□□□□ -0.33
CSMD1-210ENST00000521646 HELLSQ9NRZ9 838 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 PCDHGC3Q9UN70 934 aa13.02□□□□□ -0.33
CSMD1-210ENST00000521646 ZEB2O60315 1214 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 NBNO60934 754 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 MBTPS1Q14703 1052 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 MCMDC2Q4G0Z9 681 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 FAM47CQ5HY64 1035 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 CD320Q9NPF0 282 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 TOMM22Q9NS69 142 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 POLR3EQ9NVU0 708 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
CSMD1-210ENST00000521646 WDFY4Q6ZS81 3184 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 WDR19Q8NEZ3 1342 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 PPP1R11O60927 126 aaPredicted RBP13□□□□□ -0.33
CSMD1-210ENST00000521646 MMP3P08254 477 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 TXNP10599 105 aaKnown RBP13□□□□□ -0.33
CSMD1-210ENST00000521646 POU3F3P20264 500 aaPredicted RBP13□□□□□ -0.33
CSMD1-210ENST00000521646 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
CSMD1-210ENST00000521646 ZNF200P98182 395 aaPredicted RBP13□□□□□ -0.33
CSMD1-210ENST00000521646 GRB10Q13322 594 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 PPP2R5BQ15173 497 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 TMEM67Q5HYA8 995 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 SYTL5Q8TDW5 730 aaPredicted RBP13□□□□□ -0.33
CSMD1-210ENST00000521646 BCAS3Q9H6U6 928 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 C11orf16Q9NQ32 467 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 ADD3Q9UEY8 706 aaKnown RBP13□□□□□ -0.33
CSMD1-210ENST00000521646 TELO2Q9Y4R8 837 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 TRIOO75962 3097 aa13□□□□□ -0.33
CSMD1-210ENST00000521646 DXOO77932 396 aaKnown RBP12.99□□□□□ -0.33
CSMD1-210ENST00000521646 CPT1AP50416 773 aa12.99□□□□□ -0.33
CSMD1-210ENST00000521646 CHMP4BP1P59074 171 aa12.99□□□□□ -0.33
CSMD1-210ENST00000521646 CDC37Q16543 378 aaPredicted RBP12.99□□□□□ -0.33
CSMD1-210ENST00000521646 TRIM71Q2Q1W2 868 aaKnown RBP12.99□□□□□ -0.33
CSMD1-210ENST00000521646 LRRFIP1Q32MZ4 808 aaKnown RBP12.99□□□□□ -0.33
CSMD1-210ENST00000521646 RETREG3Q86VR2 466 aa12.99□□□□□ -0.33
CSMD1-210ENST00000521646 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
CSMD1-210ENST00000521646 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
CSMD1-210ENST00000521646 ARNTL2Q8WYA1 636 aa12.99□□□□□ -0.33
CSMD1-210ENST00000521646 GPKOWQ92917 476 aaPredicted RBP eCLIP12.99□□□□□ -0.33
CSMD1-210ENST00000521646 LNPKQ9C0E8 428 aa12.99□□□□□ -0.33
CSMD1-210ENST00000521646 EPHX3Q9H6B9 360 aa12.99□□□□□ -0.33
CSMD1-210ENST00000521646 LOC102724159A0A0B4J2E5 919 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 SORBS3O60504 671 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 WDR5P61964 334 aaKnown RBP12.98□□□□□ -0.33
CSMD1-210ENST00000521646 PWP2Q15269 919 aaKnown RBP12.98□□□□□ -0.33
CSMD1-210ENST00000521646 QRICH1Q2TAL8 776 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 SEPT14Q6ZU15 432 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 STAG2Q8N3U4 1231 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 DNERQ8NFT8 737 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 SEZ6LQ9BYH1 1024 aa12.98□□□□□ -0.33
CSMD1-210ENST00000521646 MTIF3Q9H2K0 278 aaKnown RBP12.98□□□□□ -0.33
CSMD1-210ENST00000521646 GDF9O60383 454 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 IGHDP01880 384 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 PFKMP08237 780 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 SUPT20HL2P0C7V6 817 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 ZNF286BP0CG31 522 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 PRR20EP86478 221 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 PRR20CP86479 221 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 PRR20DP86480 221 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 PRR20BP86481 221 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 PRR20AP86496 221 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 SP2Q02086 613 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
CSMD1-210ENST00000521646 PTGISQ16647 500 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 CHST3Q7LGC8 479 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 ENAHQ8N8S7 591 aaPredicted RBP12.97□□□□□ -0.33
CSMD1-210ENST00000521646 SLC9A7Q96T83 725 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 JMJD4Q9H9V9 463 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 SENP2Q9HC62 589 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 HDAC6Q9UBN7 1215 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 DDX41Q9UJV9 622 aaKnown RBP12.97□□□□□ -0.33
CSMD1-210ENST00000521646 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 MYH7BA7E2Y1 1941 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 MYH6P13533 1939 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 ATG2AQ2TAZ0 1938 aa12.97□□□□□ -0.33
CSMD1-210ENST00000521646 B4E1Z4 1266 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 HAS3O00219 553 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSMD1-210ENST00000521646 CXCL10P02778 98 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 CKBP12277 381 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 JUNDP17535 347 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 EIF2AK2P19525 551 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms