RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 HEATR3Q7Z4Q2 680 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.34□□□□□ -0.43
PVT1-209ENST00000520913 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 ZNF713Q8N859 430 aaPredicted RBP12.34□□□□□ -0.43
PVT1-209ENST00000520913 GPRASP2Q96D09 838 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 CDHR1Q96JP9 859 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 TCEANC2Q96MN5 208 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 SENP7Q9BQF6 1050 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 FTOQ9C0B1 505 aaKnown RBP eCLIP12.34□□□□□ -0.43
PVT1-209ENST00000520913 NKX2-4Q9H2Z4 354 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 SLC28A3Q9HAS3 691 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 PCDHA11Q9Y5I1 949 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 SPTBN5Q9NRC6 3674 aaKnown RBP12.34□□□□□ -0.43
PVT1-209ENST00000520913 NID2Q14112 1375 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 KLF18A0A0U1RQI7 1052 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 H3BRB1 525 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 CKBP12277 381 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 NAPAP54920 295 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 FGD1P98174 961 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 UBE2SQ16763 222 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 CYFIP1Q7L576 1253 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 TEX2Q8IWB9 1127 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
PVT1-209ENST00000520913 C16orf70Q9BSU1 422 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 USP26Q9BXU7 913 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 TUT1Q9H6E5 874 aaKnown RBP12.33□□□□□ -0.44
PVT1-209ENST00000520913 RTEL1Q9NZ71 1219 aa12.33□□□□□ -0.44
PVT1-209ENST00000520913 ZNF215Q9UL58 517 aaPredicted RBP12.33□□□□□ -0.44
PVT1-209ENST00000520913 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
PVT1-209ENST00000520913 CUL9Q8IWT3 2517 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 C17orf102A2RUQ5 167 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 REC8O95072 547 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 NEFLP07196 543 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 HOXC8P31273 242 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 KCNJ6P48051 423 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 WWC2Q6AWC2 1192 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 CNKSR3Q6P9H4 555 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 PHOSPHO2Q8TCD6 241 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 GPR20Q99678 358 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 BRPF3Q9ULD4 1205 aa12.32□□□□□ -0.44
PVT1-209ENST00000520913 CXCL10P02778 98 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 SMIM10L2AP0DMW4 78 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 SMIM10L2BP0DMW5 78 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 HSPA4P34932 840 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 METAP2P50579 478 aaKnown RBP eCLIP12.31□□□□□ -0.44
PVT1-209ENST00000520913 ADCY7P51828 1080 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 RABGGTBP53611 331 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 SP4Q02446 784 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 MTMR1Q13613 665 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 TRIM71Q2Q1W2 868 aaKnown RBP12.31□□□□□ -0.44
PVT1-209ENST00000520913 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 SERINC5Q86VE9 423 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 TRIM50Q86XT4 487 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 KCNB2Q92953 911 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 ATP6V0A1Q93050 837 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 JAKMIP1Q96N16 626 aaKnown RBP12.31□□□□□ -0.44
PVT1-209ENST00000520913 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 BCAS3Q9H6U6 928 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 RIC8AQ9NPQ8 531 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
PVT1-209ENST00000520913 PCDHA6Q9UN73 950 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 PCDHA8Q9Y5H6 950 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 EMSYQ7Z589 1322 aa12.31□□□□□ -0.44
PVT1-209ENST00000520913 XIRP2A4UGR9 3374 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 COL4A6Q14031 1691 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 CCDC196A0A1B0GTZ2 297 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 STXBP3O00186 592 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 DLL1O00548 723 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 EFCAB14O75071 495 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 CAND2O75155 1236 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 GNAT1P11488 350 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 KCNA2P16389 499 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 TCF7P36402 384 aaPredicted RBP12.3□□□□□ -0.44
PVT1-209ENST00000520913 WDR5P61964 334 aaKnown RBP12.3□□□□□ -0.44
PVT1-209ENST00000520913 ZNF200P98182 395 aaPredicted RBP12.3□□□□□ -0.44
PVT1-209ENST00000520913 FUT2Q10981 343 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 AP3B2Q13367 1082 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 HIC1Q14526 733 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 ZNF618Q5T7W0 954 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 WNT8BQ93098 351 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 GLT8D2Q9H1C3 349 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 BARHL2Q9NY43 387 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 UBIAD1Q9Y5Z9 338 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 KIAA1671Q9BY89 1806 aa12.3□□□□□ -0.44
PVT1-209ENST00000520913 KIF28PB7ZC32 967 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 MAFGO15525 162 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 EPB41L2O43491 1005 aaKnown RBP12.29□□□□□ -0.44
PVT1-209ENST00000520913 NBNO60934 754 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 FOSP01100 380 aaPredicted RBP12.29□□□□□ -0.44
PVT1-209ENST00000520913 CA3P07451 260 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 CPA1P15085 419 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 MYOGP15173 224 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 ITGB5P18084 799 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 CDC27P30260 824 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 APOBRQ0VD83 1088 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 GPNMBQ14956 572 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms