RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 FCGRTP55899 365 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 ZBED6P86452 979 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 AKAP17AQ02040 695 aaKnown RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 Q4G0T1 1027 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 RPS26P11Q5JNZ5 115 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 RNF187Q5TA31 235 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 SFMBT2Q5VUG0 894 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 MSL1Q68DK7 614 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 KDM7AQ6ZMT4 941 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 CCDC73Q6ZRK6 1079 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 C11orf57Q6ZUT1 292 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 ARHGEF25Q86VW2 580 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 MYOCDQ8IZQ8 938 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 IL22RA1Q8N6P7 574 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 ASAP3Q8TDY4 903 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 ANKRD24Q8TF21 1146 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 CCDC12Q8WUD4 166 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 PPP2R3CQ969Q6 453 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 SCLT1Q96NL6 688 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 IWS1Q96ST2 819 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 NOD2Q9HC29 1040 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 TUBA8Q9NY65 449 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 DDX25Q9UHL0 483 aaKnown RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 BARX2Q9UMQ3 279 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 ZNF510Q9Y2H8 683 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 TMEM98Q9Y2Y6 226 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 RIPOR2Q9Y4F9 1068 aa9.57□□□□□ -0.88
SHPRH-208ENST00000520752 CTDP1Q9Y5B0 961 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-208ENST00000520752 LMTK2Q8IWU2 1503 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 CTAGE9A4FU28 777 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 FANCGO15287 622 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 SMIM24O75264 130 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 ATP6V1G2O95670 118 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 FAM107AO95990 144 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 CCDC175P0C221 793 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 LINGO3P0C6S8 592 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 CCND1P24385 295 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 USP14P54578 494 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 SNRPNP63162 240 aaKnown RBP9.56□□□□□ -0.88
SHPRH-208ENST00000520752 CKAP4Q07065 602 aaKnown RBP9.56□□□□□ -0.88
SHPRH-208ENST00000520752 NAA35Q5VZE5 725 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 PPP4R3AQ6IN85 833 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 CCDC70Q6NSX1 233 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 DTHD1Q6ZMT9 781 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 SEPT14Q6ZU15 432 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 VN1R5Q7Z5H4 357 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 WFDC8Q8IUA0 241 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 AOPEPQ8N6M6 819 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 CFAP61Q8NHU2 1237 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 ZNF473Q8WTR7 871 aaKnown RBP9.56□□□□□ -0.88
SHPRH-208ENST00000520752 WDR24Q96S15 920 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 YIPF3Q9GZM5 350 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 IFNKQ9P0W0 207 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 WDR35Q9P2L0 1181 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 VTI1BQ9UEU0 232 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 THRAP3Q9Y2W1 955 aaKnown RBP9.56□□□□□ -0.88
SHPRH-208ENST00000520752 PPME1Q9Y570 386 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 ABCA6Q8N139 1617 aa9.56□□□□□ -0.88
SHPRH-208ENST00000520752 ZC3H13Q5T200 1668 aaKnown RBP9.55□□□□□ -0.88
SHPRH-208ENST00000520752 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 GPR75-ASB3A0A0A6YYF3 556 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 FRMD3A2A2Y4 597 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 IPO5O00410 1097 aaKnown RBP9.55□□□□□ -0.88
SHPRH-208ENST00000520752 SKAP2O75563 359 aaPredicted RBP9.55□□□□□ -0.88
SHPRH-208ENST00000520752 ZNF202O95125 648 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 RPSAP08865 295 aaKnown RBP9.55□□□□□ -0.88
SHPRH-208ENST00000520752 CTSHP09668 335 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 USP17L7P0C7H9 530 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 PDHBP11177 359 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 PRPF4BQ13523 1007 aaKnown RBP9.55□□□□□ -0.88
SHPRH-208ENST00000520752 MYBPC3Q14896 1274 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 USH1GQ495M9 461 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 LARP1BQ659C4 914 aaKnown RBP9.55□□□□□ -0.88
SHPRH-208ENST00000520752 IQCEQ6IPM2 695 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 VSTM4Q8IW00 320 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 LMNTD2Q8IXW0 634 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 ARHGAP18Q8N392 663 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 ERMNQ8TAM6 284 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 ALDH8A1Q9H2A2 487 aaPredicted RBP9.55□□□□□ -0.88
SHPRH-208ENST00000520752 VCX3BQ9H321 246 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 VCX3AQ9NNX9 186 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 PALD1Q9ULE6 856 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 DAAM1Q9Y4D1 1078 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 ASB3Q9Y575 518 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 SLC4A7Q9Y6M7 1214 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 RIMBP3CA6NJZ7 1639 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 RIMBP3BA6NNM3 1639 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 RIMBP3Q9UFD9 1639 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 ABCC3O15438 1527 aa9.55□□□□□ -0.88
SHPRH-208ENST00000520752 URB2Q14146 1524 aaKnown RBP9.55□□□□□ -0.88
SHPRH-208ENST00000520752 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 TMEM221A6NGB7 291 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 E7ENQ6 273 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 PIK3R2O00459 728 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 GSTA2P09210 222 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 TOP1P11387 765 aaKnown RBP9.54□□□□□ -0.88
SHPRH-208ENST00000520752 ALADP13716 330 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 PDE1AP54750 535 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms