RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 K7ESM1 405 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 LRG1P02750 347 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 SSRP1Q08945 709 aaKnown RBP6.76□□□□□ -1.33
SKP1-207ENST00000520417 SPIRE1Q08AE8 756 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 ZFYVE27Q5T4F4 411 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 LBX2Q6XYB7 198 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 TRIM48Q8IWZ4 208 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 PHOSPHO1Q8TCT1 267 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 ASH2LQ9UBL3 628 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 TRAF6Q9Y4K3 522 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 ZNF536O15090 1300 aa6.76□□□□□ -1.33
SKP1-207ENST00000520417 LTFP02788 710 aa6.75□□□□□ -1.33
SKP1-207ENST00000520417 SOD2P04179 222 aa6.75□□□□□ -1.33
SKP1-207ENST00000520417 PHF19Q5T6S3 580 aa6.75□□□□□ -1.33
SKP1-207ENST00000520417 BORAQ6PGQ7 559 aa6.75□□□□□ -1.33
SKP1-207ENST00000520417 OTOP3Q7RTS5 596 aa6.75□□□□□ -1.33
SKP1-207ENST00000520417 ALG1Q9BT22 464 aa6.75□□□□□ -1.33
SKP1-207ENST00000520417 CDIP1Q9H305 208 aa6.75□□□□□ -1.33
SKP1-207ENST00000520417 IL13P35225 146 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 GPR85P60893 370 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 TUSC3Q13454 348 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 FAM26FQ5R3K3 315 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 TRMT10BQ6PF06 316 aaKnown RBP6.74□□□□□ -1.33
SKP1-207ENST00000520417 DPH6Q7L8W6 267 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 MTDHQ86UE4 582 aaKnown RBP6.74□□□□□ -1.33
SKP1-207ENST00000520417 CLEC4DQ8WXI8 215 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 LCORQ96JN0 433 aaPredicted RBP6.74□□□□□ -1.33
SKP1-207ENST00000520417 TMEM209Q96SK2 561 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 IPPKQ9H8X2 491 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 INVSQ9Y283 1065 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 NUB1Q9Y5A7 615 aa6.74□□□□□ -1.33
SKP1-207ENST00000520417 FAM47E-STBD1D6RA91 191 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 NKRFO15226 690 aaKnown RBP eCLIP6.73□□□□□ -1.33
SKP1-207ENST00000520417 CYP7B1O75881 506 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 VASNQ6EMK4 673 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 STYK1Q6J9G0 422 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 CYP4F22Q6NT55 531 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 LGI4Q8N135 537 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.73□□□□□ -1.33
SKP1-207ENST00000520417 ZFYVE21Q9BQ24 234 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 TMEM168Q9H0V1 697 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 FTSJ1Q9UET6 329 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 DSEQ9UL01 958 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 ASXL2Q76L83 1435 aa6.73□□□□□ -1.33
SKP1-207ENST00000520417 GLRBP48167 497 aa6.72□□□□□ -1.33
SKP1-207ENST00000520417 MLLT6P55198 1093 aaPredicted RBP6.72□□□□□ -1.33
SKP1-207ENST00000520417 FAM209AQ5JX71 171 aa6.72□□□□□ -1.33
SKP1-207ENST00000520417 PRR31Q5SQ13 230 aa6.72□□□□□ -1.33
SKP1-207ENST00000520417 ZDHHC9Q9Y397 364 aa6.72□□□□□ -1.33
SKP1-207ENST00000520417 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 DIAPH1O60610 1272 aaKnown RBP6.71□□□□□ -1.34
SKP1-207ENST00000520417 FBXO21O94952 628 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 ZNF28P17035 718 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 RASGRF1Q13972 1273 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 ZNF827Q17R98 1081 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 SPATS1Q496A3 300 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 PAN2Q504Q3 1202 aaKnown RBP6.71□□□□□ -1.34
SKP1-207ENST00000520417 EP400NLQ6ZTU2 488 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 SCUBE1Q8IWY4 988 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 LOXL4Q96JB6 756 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 WRNIP1Q96S55 665 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 HIRIP3Q9BW71 556 aaPredicted RBP6.71□□□□□ -1.34
SKP1-207ENST00000520417 CD244Q9BZW8 370 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 JADE2Q9NQC1 790 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 SIRPGQ9P1W8 387 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 WASF3Q9UPY6 502 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 MSRB2Q9Y3D2 182 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 KDM2BQ8NHM5 1336 aa6.71□□□□□ -1.34
SKP1-207ENST00000520417 SRGAP2CP0DJJ0 459 aa6.7□□□□□ -1.34
SKP1-207ENST00000520417 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.7□□□□□ -1.34
SKP1-207ENST00000520417 UHMK1Q8TAS1 419 aaKnown RBP6.7□□□□□ -1.34
SKP1-207ENST00000520417 ZNF669Q96BR6 464 aaPredicted RBP6.7□□□□□ -1.34
SKP1-207ENST00000520417 CCDC113Q9H0I3 377 aa6.7□□□□□ -1.34
SKP1-207ENST00000520417 CATSPERZQ9NTU4 200 aa6.7□□□□□ -1.34
SKP1-207ENST00000520417 PCDHA8Q9Y5H6 950 aa6.7□□□□□ -1.34
SKP1-207ENST00000520417 AQP7O14520 342 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 CKMP06732 381 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 ADRB1P08588 477 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 FAM153BP0C7A2 387 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 FAHP16930 419 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 KRT15P19012 456 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 SUMO1P63165 101 aaKnown RBP6.69□□□□□ -1.34
SKP1-207ENST00000520417 GUCY1A3Q02108 690 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 PAK1Q13153 545 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 TBC1D10BQ4KMP7 808 aaPredicted RBP6.69□□□□□ -1.34
SKP1-207ENST00000520417 FOXB2Q5VYV0 432 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 KCTD1Q719H9 257 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 ZBTB38Q8NAP3 1195 aaPredicted RBP6.69□□□□□ -1.34
SKP1-207ENST00000520417 TTLL11Q8NHH1 800 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 PMFBP1Q8TBY8 1022 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 ZCCHC14Q8WYQ9 949 aaKnown RBP6.69□□□□□ -1.34
SKP1-207ENST00000520417 GPR20Q99678 358 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 DLL4Q9NR61 685 aa6.69□□□□□ -1.34
SKP1-207ENST00000520417 ADCY3O60266 1144 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 PLATP00750 562 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 ST5P78524 1137 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 SKIDA1Q1XH10 827 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 NBPF6Q5VWK0 638 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 GLB1LQ6UWU2 654 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 HHIPL2Q6UWX4 724 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms