RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 PPP4R4Q6NUP7 873 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 EP400NLQ6ZTU2 488 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 PAWRQ96IZ0 340 aaKnown RBP13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 GSDMAQ96QA5 445 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 AMNQ9BXJ7 453 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 G3BP2Q9UN86 482 aaKnown RBP13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 ERBB3P21860 1342 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 MMP1P03956 469 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 TBCCQ15814 346 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 CCDC197Q8NCU1 140 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 HAUS4Q9H6D7 363 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 GSTA4O15217 222 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 YARSP54577 528 aaKnown RBP13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 MYL7Q01449 175 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 PPP2R5EQ16537 467 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 UBAP1Q9NZ09 502 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 KLHL14Q9P2G3 628 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 LARP4BQ92615 738 aaKnown RBP13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 CCDC138Q96M89 665 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 PUS7LQ9H0K6 701 aaKnown RBP13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 KIAA1024Q9UPX6 916 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 LAMC1P11047 1609 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 GLI2P10070 1586 aa13.1□□□□□ -0.31
ERGIC1-208ENST00000520399 CDC42BPBQ9Y5S2 1711 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 KIF23Q02241 960 aaPredicted RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 HADHQ16836 314 aaKnown RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 OLFM3Q96PB7 478 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 CSRNP1Q96S65 589 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 NEUROG2Q9H2A3 272 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 NRBP2Q9NSY0 501 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 SPTLC3Q9NUV7 552 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 SERPINB6P35237 376 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 BSPRYQ5W0U4 402 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 KLHL23Q8NBE8 558 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 LZICQ8WZA0 190 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 TRPC5Q9UL62 973 aaPredicted RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 SPHKAPQ2M3C7 1700 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 SEC31AO94979 1220 aaKnown RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 SERPINB2P05120 415 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 TMED10P49755 219 aaKnown RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 GUCY2FP51841 1108 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 CUL4AQ13619 759 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 PARP9Q8IXQ6 854 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 ZRANB2O95218 330 aaKnown RBP eCLIP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 GAP43P17677 238 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 ATICP31939 592 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 PIK3CAP42336 1068 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 WDR75Q8IWA0 830 aaKnown RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 KLC4Q9NSK0 619 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 PYCARDQ9ULZ3 195 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 ARAP3Q8WWN8 1544 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
ERGIC1-208ENST00000520399 ZNF658Q5TYW1 1059 aaPredicted RBP13.08□□□□□ -0.31
ERGIC1-208ENST00000520399 HIBCHQ6NVY1 386 aaPredicted RBP13.08□□□□□ -0.31
ERGIC1-208ENST00000520399 CTAGE3PQ8IX95 158 aa13.08□□□□□ -0.31
ERGIC1-208ENST00000520399 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.31
ERGIC1-208ENST00000520399 ZNF653Q96CK0 615 aa13.08□□□□□ -0.31
ERGIC1-208ENST00000520399 PLEKHA4Q9H4M7 779 aa13.08□□□□□ -0.31
ERGIC1-208ENST00000520399 ANAPC5Q9UJX4 755 aa13.08□□□□□ -0.31
ERGIC1-208ENST00000520399 EFCAB14O75071 495 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 SUCLA2Q9P2R7 463 aaPredicted RBP13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 CROCC2H7BZ55 1655 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 IKBKBO14920 756 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 PRPF3O43395 683 aaKnown RBP13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 PRKAB2O43741 272 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 KRT71Q3SY84 523 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 SLC13A4Q9UKG4 626 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 FAM170AA1A519 330 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 TCP1P17987 556 aaKnown RBP13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 STX1BP61266 288 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 MAN1B1Q9UKM7 699 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 LMNB1P20700 586 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 PRPSAP1Q14558 356 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 CCDC13Q8IYE1 715 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 ZNF577Q9BSK1 485 aa13.08□□□□□ -0.32
ERGIC1-208ENST00000520399 NVLO15381 856 aaKnown RBP13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 RGS16O15492 202 aaPredicted RBP13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 BBOX1O75936 387 aa13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 XPAP23025 273 aaPredicted RBP13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 EEF1GP26641 437 aaKnown RBP13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 EXOC3L4Q17RC7 722 aa13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 TUBGCP2Q9BSJ2 902 aa13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 KRT82Q9NSB4 513 aa13.07□□□□□ -0.32
ERGIC1-208ENST00000520399 BZW2Q9Y6E2 419 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms