RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 ATP9AO75110 1047 aa13.47□□□□□ -0.25
HPS4-218ENST00000519774 CUL4AQ13619 759 aa13.47□□□□□ -0.25
HPS4-218ENST00000519774 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
HPS4-218ENST00000519774 LRRC26Q2I0M4 334 aa13.47□□□□□ -0.25
HPS4-218ENST00000519774 PRR16Q569H4 304 aa13.47□□□□□ -0.25
HPS4-218ENST00000519774 MYSM1Q5VVJ2 828 aa13.47□□□□□ -0.25
HPS4-218ENST00000519774 DPF3Q92784 378 aa13.47□□□□□ -0.25
HPS4-218ENST00000519774 EMID1Q96A84 441 aaPredicted RBP13.47□□□□□ -0.25
HPS4-218ENST00000519774 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
HPS4-218ENST00000519774 IGLV3-22A0A075B6J6 115 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 A6NJR5 290 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 MEIS1O00470 390 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 MAFGO15525 162 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 TDP2O95551 362 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 KCNA2P16389 499 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 CHMP4BP1P59074 171 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 PSMC6P62333 389 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
HPS4-218ENST00000519774 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
HPS4-218ENST00000519774 LETM2Q2VYF4 491 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 HSDL1Q3SXM5 330 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 EARS2Q5JPH6 523 aaKnown RBP13.46□□□□□ -0.25
HPS4-218ENST00000519774 METTL7BQ6UX53 244 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 NIPA1Q7RTP0 329 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 NEK8Q86SG6 692 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
HPS4-218ENST00000519774 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 PPTC7Q8NI37 304 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 TNFRSF25Q93038 417 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 SNX21Q969T3 373 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 SENP7Q9BQF6 1050 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 AGO4Q9HCK5 861 aaKnown RBP13.46□□□□□ -0.25
HPS4-218ENST00000519774 ATP11BQ9Y2G3 1177 aa13.46□□□□□ -0.25
HPS4-218ENST00000519774 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
HPS4-218ENST00000519774 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
HPS4-218ENST00000519774 EDIL3O43854 480 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 CABYRO75952 493 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 ZNF286BP0CG31 522 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 CIITAP33076 1130 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 USP11P51784 963 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 RTP1P59025 263 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 DGKDQ16760 1214 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 ZNF577Q9BSK1 485 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 MTG1Q9BT17 334 aaPredicted RBP13.45□□□□□ -0.26
HPS4-218ENST00000519774 JPH1Q9HDC5 661 aaPredicted RBP13.45□□□□□ -0.26
HPS4-218ENST00000519774 TELO2Q9Y4R8 837 aa13.45□□□□□ -0.26
HPS4-218ENST00000519774 ELP1O95163 1332 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 H3BQV1 296 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 EVI5O60447 810 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 CCNT1O60563 726 aaKnown RBP13.44□□□□□ -0.26
HPS4-218ENST00000519774 KPNA6O60684 536 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 ITGB3BPQ13352 177 aaPredicted RBP13.44□□□□□ -0.26
HPS4-218ENST00000519774 TRIM60Q495X7 471 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 UTP14CQ5TAP6 766 aaKnown RBP13.44□□□□□ -0.26
HPS4-218ENST00000519774 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 PPP1R13LQ8WUF5 828 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 LENG9Q96B70 501 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 SLC9A2Q9UBY0 812 aa13.44□□□□□ -0.26
HPS4-218ENST00000519774 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 NFASCO94856 1347 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 IPO5O00410 1097 aaKnown RBP13.43□□□□□ -0.26
HPS4-218ENST00000519774 MSH4O15457 936 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
HPS4-218ENST00000519774 HSP90AA1P07900 732 aaKnown RBP13.43□□□□□ -0.26
HPS4-218ENST00000519774 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 ITGA7Q13683 1181 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 SNX17Q15036 470 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 LARP1BQ659C4 914 aaKnown RBP13.43□□□□□ -0.26
HPS4-218ENST00000519774 MCTP1Q6DN14 999 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 GPR20Q99678 358 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 DDX25Q9UHL0 483 aaKnown RBP13.43□□□□□ -0.26
HPS4-218ENST00000519774 TCEAL9Q9UHQ7 104 aa13.43□□□□□ -0.26
HPS4-218ENST00000519774 ARVCFO00192 962 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 SLC37A4O43826 429 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 PPFIA4O75335 1185 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 LGALS2P05162 132 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 HOXD8P13378 290 aaPredicted RBP13.42□□□□□ -0.26
HPS4-218ENST00000519774 GCFC2P16383 781 aaKnown RBP13.42□□□□□ -0.26
HPS4-218ENST00000519774 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
HPS4-218ENST00000519774 PSEN2P49810 448 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 TLE2Q04725 743 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 Q4G0T1 1027 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 FAM47CQ5HY64 1035 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 TRIM50Q86XT4 487 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 GJA10Q969M2 543 aa13.42□□□□□ -0.26
HPS4-218ENST00000519774 FOXP1Q9H334 677 aaPredicted RBP13.42□□□□□ -0.26
HPS4-218ENST00000519774 GRIN2DO15399 1336 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 PDE4DIPQ5VU43 2346 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 GSTTP1A0A1W2PQM5 241 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
HPS4-218ENST00000519774 WNT7AO00755 349 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 GAS7O60861 476 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 F2P00734 622 aa13.41□□□□□ -0.26
HPS4-218ENST00000519774 CYP3A7P24462 503 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms