RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 SMARCC2Q8TAQ2 1214 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 SYMPKQ92797 1274 aaKnown RBP14.34□□□□□ -0.11
CSMD1-205ENST00000519623 GPR20Q99678 358 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 USP26Q9BXU7 913 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 LRRC2Q9BYS8 371 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 RNPEPQ9H4A4 650 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 PSTPIP2Q9H939 334 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 CERS4Q9HA82 394 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 ANO2Q9NQ90 1003 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 SEC63Q9UGP8 760 aaKnown RBP14.34□□□□□ -0.11
CSMD1-205ENST00000519623 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 EPOPA6NHQ4 379 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 KIF28PB7ZC32 967 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 FIBPO43427 364 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 CALM1P0DP23 149 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 CALM2P0DP24 149 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 CALM3P0DP25 149 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 KCNJ6P48051 423 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 TJAP1Q5JTD0 557 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
CSMD1-205ENST00000519623 SGMS1Q86VZ5 419 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 CUL5Q93034 780 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 SENP7Q9BQF6 1050 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 SLC12A7Q9Y666 1083 aa14.33□□□□□ -0.12
CSMD1-205ENST00000519623 NCOR1O75376 2440 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 C17orf102A2RUQ5 167 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 TREHO43280 583 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 SMIM10L2AP0DMW4 78 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 SMIM10L2BP0DMW5 78 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 DEFB103AP81534 67 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 EXOSC10Q01780 885 aaKnown RBP14.32□□□□□ -0.12
CSMD1-205ENST00000519623 TMTC3Q6ZXV5 915 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 ATXN2LQ8WWM7 1075 aaKnown RBP14.32□□□□□ -0.12
CSMD1-205ENST00000519623 ATP6V0A1Q93050 837 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 MTCH2Q9Y6C9 303 aa14.32□□□□□ -0.12
CSMD1-205ENST00000519623 LCHNA4D1U4 455 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 RSPH10B2B2RC85 870 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 NOP56O00567 594 aaKnown RBP14.31□□□□□ -0.12
CSMD1-205ENST00000519623 TLL1O43897 1013 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 ATP9AO75110 1047 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 LGR5O75473 907 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 RSPH10BP0C881 870 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 THPOP40225 353 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 ADAM17P78536 824 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
CSMD1-205ENST00000519623 IKBKEQ14164 716 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 TSGA10IPQ3SY00 556 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
CSMD1-205ENST00000519623 SPRED2Q7Z698 418 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 NLRX1Q86UT6 975 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 ARNTL2Q8WYA1 636 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 NEK1Q96PY6 1258 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 ASB2Q96Q27 587 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 SETD4Q9NVD3 440 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 REV3LO60673 3130 aa14.31□□□□□ -0.12
CSMD1-205ENST00000519623 LPXNO60711 386 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 EFCAB14O75071 495 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 GJB5O95377 273 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 KCNA2P16389 499 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 ITGB5P18084 799 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 UBE2SQ16763 222 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 KRT40Q6A162 431 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 TRIM50Q86XT4 487 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 DBF4BQ8NFT6 615 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 GPRASP2Q96D09 838 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 OSBPL7Q9BZF2 842 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 THEGQ9P2T0 379 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 BRPF3Q9ULD4 1205 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 UBIAD1Q9Y5Z9 338 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 KAT6AQ92794 2004 aa14.3□□□□□ -0.12
CSMD1-205ENST00000519623 MRPS5P82675 430 aaKnown RBP14.29□□□□□ -0.12
CSMD1-205ENST00000519623 FUT2Q10981 343 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 ADCK5Q3MIX3 580 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 PLEKHG4Q58EX7 1191 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 UTP14CQ5TAP6 766 aaKnown RBP14.29□□□□□ -0.12
CSMD1-205ENST00000519623 RNF20Q5VTR2 975 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 APOA5Q6Q788 366 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
CSMD1-205ENST00000519623 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
CSMD1-205ENST00000519623 MICU3Q86XE3 530 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 GIMAP8Q8ND71 665 aaPredicted RBP14.29□□□□□ -0.12
CSMD1-205ENST00000519623 RAD9AQ99638 391 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 ZBED2Q9BTP6 218 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 PCDHA6Q9UN73 950 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 PCDHA8Q9Y5H6 950 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 EMSYQ7Z589 1322 aa14.29□□□□□ -0.12
CSMD1-205ENST00000519623 GSTTP1A0A1W2PQM5 241 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 CAND2O75155 1236 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 GNAT1P11488 350 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 SP4Q02446 784 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 GRB10Q13322 594 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 TYW1BQ6NUM6 668 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 SYNE3Q6ZMZ3 975 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 HEATR3Q7Z4Q2 680 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 MICALL1Q8N3F8 863 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms