RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 SENP7Q9BQF6 1050 aa14.32□□□□□ -0.12
TRAPPC9-206ENST00000519482 USP26Q9BXU7 913 aa14.32□□□□□ -0.12
TRAPPC9-206ENST00000519482 TUT1Q9H6E5 874 aaKnown RBP14.32□□□□□ -0.12
TRAPPC9-206ENST00000519482 SLC12A7Q9Y666 1083 aa14.32□□□□□ -0.12
TRAPPC9-206ENST00000519482 CHD7Q9P2D1 2997 aa14.32□□□□□ -0.12
TRAPPC9-206ENST00000519482 NOP56O00567 594 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 LGALS2P05162 132 aa14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 CA3P07451 260 aa14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 COL9A3Q14050 684 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 TRIM71Q2Q1W2 868 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 NLRX1Q86UT6 975 aa14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 HERC6Q8IVU3 1022 aa14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 FANCBQ8NB91 859 aa14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 RTEL1Q9NZ71 1219 aa14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 MICAL3Q7RTP6 2002 aa14.31□□□□□ -0.12
TRAPPC9-206ENST00000519482 SPTBN5Q9NRC6 3674 aaKnown RBP14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 ABHD14A-ACY1A0A1B0GW23 586 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 C17orf102A2RUQ5 167 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 EPB41L2O43491 1005 aaKnown RBP14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 NBNO60934 754 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 EFCAB14O75071 495 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 RXRAP19793 462 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 IGFBP4P22692 258 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 HOXC8P31273 242 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 TRAF7Q6Q0C0 670 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 SYNE3Q6ZMZ3 975 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 TMTC3Q6ZXV5 915 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 CYFIP1Q7L576 1253 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 SERINC5Q86VE9 423 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 GIMAP8Q8ND71 665 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 NEK1Q96PY6 1258 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 BCAS3Q9H6U6 928 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 PSTPIP2Q9H939 334 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 EMSYQ7Z589 1322 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 VCANP13611 3396 aa14.3□□□□□ -0.12
TRAPPC9-206ENST00000519482 REC8O95072 547 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 POU3F3P20264 500 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 WDR5P61964 334 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 ZNF200P98182 395 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 IKBKEQ14164 716 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 HIC1Q14526 733 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 TSGA10IPQ3SY00 556 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 ZNF618Q5T7W0 954 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 TEX2Q8IWB9 1127 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 PPM1EQ8WY54 764 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 ATP6V0A1Q93050 837 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 WNT8BQ93098 351 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 SNX21Q969T3 373 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 GPRASP2Q96D09 838 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 CDHR1Q96JP9 859 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 GPR20Q99678 358 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 LRRC2Q9BYS8 371 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 RNPEPQ9H4A4 650 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 RBM28Q9NW13 759 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 ZNF215Q9UL58 517 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 TTC28Q96AY4 2481 aa14.29□□□□□ -0.12
TRAPPC9-206ENST00000519482 TLL1O43897 1013 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 CAND2O75155 1236 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 SMIM10L2AP0DMW4 78 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 SMIM10L2BP0DMW5 78 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 GNAT1P11488 350 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 EXOSC10Q01780 885 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 TAP1Q03518 808 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 TJAP1Q5JTD0 557 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 APOA5Q6Q788 366 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 MICU3Q86XE3 530 aa14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 ATXN2LQ8WWM7 1075 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-206ENST00000519482 SPDYE3A6NKU9 549 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 MAFGO15525 162 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 LGR5O75473 907 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 THPOP40225 353 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 KRT32Q14532 448 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 MBTPS1Q14703 1052 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 DHX32Q7L7V1 743 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 RAB11FIP4Q86YS3 637 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 CCDC82Q8N4S0 544 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 ZBED2Q9BTP6 218 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 TSPYL2Q9H2G4 693 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 PRDM6Q9NQX0 595 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 THEGQ9P2T0 379 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 SIP14410 1827 aa14.27□□□□□ -0.13
TRAPPC9-206ENST00000519482 COL4A4P53420 1690 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 PRRC2BQ5JSZ5 2229 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 hCG_1642624A0A1W2PR95 340 aa14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 hCG_1984214I3L0E3 225 aa14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 TREHO43280 583 aa14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 GTPBP6O43824 516 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 GJB5O95377 273 aa14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 HMGB1P09429 215 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 DEFB103AP81534 67 aa14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 TCTN1Q2MV58 587 aa14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 PPP1R18Q6NYC8 613 aa14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 HEATR3Q7Z4Q2 680 aa14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 ZNF713Q8N859 430 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-206ENST00000519482 EHMT1Q9H9B1 1298 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms