RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SAMD15Q9P1V8 674 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 MYOTQ9UBF9 498 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 ASH2LQ9UBL3 628 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 DSEQ9UL01 958 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 COQ6Q9Y2Z9 468 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 SIT1Q9Y3P8 196 aa5.31□□□□□ -1.56
VPS13B-207ENST00000518569 TCRBV5S4A2TA0A5A2 114 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 FAM83GA6ND36 823 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 GSG1L2A8MUP6 293 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 ZNF561-AS1K7EIQ3 104 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 AMY2AP04746 511 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 COL6A2P12110 1019 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 PDE6AP16499 860 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 AMY2BP19961 511 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 FBLN1P23142 703 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 MESP2Q0VG99 397 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 CFAP100Q494V2 611 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 TMEM177Q53S58 311 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 HHIPL2Q6UWX4 724 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 ARHGAP36Q6ZRI8 547 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 AMIGO3Q86WK7 504 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 LDHDQ86WU2 507 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 FAM126BQ8IXS8 530 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 FAM177A1Q8N128 213 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-207ENST00000518569 CPA5Q8WXQ8 436 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 ALG3Q92685 438 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 WNK4Q96J92 1243 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 FAM84AQ96KN4 292 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 TARS2Q9BW92 718 aaKnown RBP5.3□□□□□ -1.56
VPS13B-207ENST00000518569 NGRNQ9NPE2 291 aaKnown RBP5.3□□□□□ -1.56
VPS13B-207ENST00000518569 HSPBP1Q9NZL4 362 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 MBD1Q9UIS9 605 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-207ENST00000518569 HCFC2Q9Y5Z7 792 aa5.3□□□□□ -1.56
VPS13B-207ENST00000518569 SLC27A2O14975 620 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 PDE8AO60658 829 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 CLASP2O75122 1294 aaKnown RBP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 GLRX3O76003 335 aaKnown RBP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 VIL1P09327 827 aaKnown RBP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 MYCLP1P12525 358 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 NCAM1P13591 858 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 GLDCP23378 1020 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 GJA4P35212 333 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 MECP2P51608 486 aaKnown RBP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 TARBP2Q15633 366 aaKnown RBP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 FIGNQ5HY92 759 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 RNF187Q5TA31 235 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 PIK3R6Q5UE93 754 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 TMEM132EQ6IEE7 984 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 CNNM4Q6P4Q7 775 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 KCTD1Q719H9 257 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 OTOP1Q7RTM1 612 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 KRT26Q7Z3Y9 468 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 OSTM1Q86WC4 334 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 THNSL2Q86YJ6 484 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 BHLHE22Q8NFJ8 381 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 SH3RF2Q8TEC5 729 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 MTFR1LQ9H019 292 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 CNTD2Q9H8S5 307 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 SMURF1Q9HCE7 757 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 PCDH18Q9HCL0 1135 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 CABP5Q9NP86 173 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS13B-207ENST00000518569 SRPK3Q9UPE1 567 aa5.29□□□□□ -1.56
VPS13B-207ENST00000518569 M0R2C6 588 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 CBX4O00257 560 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 MAN2B1O00754 1011 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 N4BP3O15049 544 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 ASGR2P07307 311 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 PFKLP17858 780 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 PMLP29590 882 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 STAT3P40763 770 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 NEK4P51957 841 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 JAM2P57087 298 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 ZNF200P98182 395 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-207ENST00000518569 TUSC3Q13454 348 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 ETV3LQ6ZN32 361 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 EP400NLQ6ZTU2 488 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-207ENST00000518569 C2orf69Q8N8R5 385 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 CHST14Q8NCH0 376 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 KCNN1Q92952 543 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 PPP1R16BQ96T49 567 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 CAAP1Q9H8G2 361 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 SPC25Q9HBM1 224 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 GCM1Q9NP62 436 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 DTLQ9NZJ0 730 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 B4GALT6Q9UBX8 382 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 PCDHA5Q9Y5H7 936 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 ATP23Q9Y6H3 246 aa5.28□□□□□ -1.56
VPS13B-207ENST00000518569 SLC12A8A0AV02 714 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 TRAF5O00463 557 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 MED14OSP0DP75 135 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 SOX5P35711 763 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 CDR1P51861 262 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 DLG4P78352 724 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 CACNB2Q08289 660 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-207ENST00000518569 ZNF662Q6ZS27 426 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 RNF180Q86T96 592 aa5.27□□□□□ -1.57
VPS13B-207ENST00000518569 PTRH1Q86Y79 214 aaKnown RBP5.27□□□□□ -1.57
VPS13B-207ENST00000518569 CISD2Q8N5K1 135 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms