RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 SGSM2O43147 1006 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 BRINP1O60477 761 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 GAS7O60861 476 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 HIP1RO75146 1068 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 F2P00734 622 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 SCNN1BP51168 640 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 TARBP2Q15633 366 aaKnown RBP4.3□□□□□ -1.72
SKP1-203ENST00000517625 PTPROQ16827 1216 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 MCTP1Q6DN14 999 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 PKN3Q6P5Z2 889 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 ARHGAP36Q6ZRI8 547 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 KCTD1Q719H9 257 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 DDX46Q7L014 1031 aaKnown RBP4.3□□□□□ -1.72
SKP1-203ENST00000517625 AMIGO3Q86WK7 504 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 FAM126BQ8IXS8 530 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 AFAP1L2Q8N4X5 818 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 C2orf69Q8N8R5 385 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.3□□□□□ -1.72
SKP1-203ENST00000517625 SMURF1Q9HCE7 757 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 MCM8Q9UJA3 840 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 PALD1Q9ULE6 856 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 APOBEC2Q9Y235 224 aaKnown RBP4.3□□□□□ -1.72
SKP1-203ENST00000517625 ZKSCAN5Q9Y2L8 839 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 NOP58Q9Y2X3 529 aaKnown RBP4.3□□□□□ -1.72
SKP1-203ENST00000517625 ATP23Q9Y6H3 246 aa4.3□□□□□ -1.72
SKP1-203ENST00000517625 CARMIL2Q6F5E8 1435 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 TEX51A0A1B0GUA7 166 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 TCRBV5S2A0A599 114 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 ZC3H12DA2A288 527 aaKnown RBP4.29□□□□□ -1.72
SKP1-203ENST00000517625 NKRFO15226 690 aaKnown RBP eCLIP4.29□□□□□ -1.721e-7■□□□□ 8.2
SKP1-203ENST00000517625 ZEB2O60315 1214 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 KPNA6O60684 536 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 AMY2AP04746 511 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 TAL1P17542 331 aaPredicted RBP4.29□□□□□ -1.72
SKP1-203ENST00000517625 AMY2BP19961 511 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 CNGA1P29973 690 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 LSSP48449 732 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 HERVK_113P62684 666 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 PRR5P85299 388 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 DSG1Q02413 1049 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 SART3Q15020 963 aaKnown RBP4.29□□□□□ -1.72
SKP1-203ENST00000517625 MILR1Q7Z6M3 343 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.29□□□□□ -1.72
SKP1-203ENST00000517625 ZC3H18Q86VM9 953 aaKnown RBP4.29□□□□□ -1.72
SKP1-203ENST00000517625 NOSTRINQ8IVI9 506 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 CISD2Q8N5K1 135 aaKnown RBP4.29□□□□□ -1.72
SKP1-203ENST00000517625 MTFR1LQ9H019 292 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 DCP1AQ9NPI6 582 aaPredicted RBP4.29□□□□□ -1.72
SKP1-203ENST00000517625 COL4A3BPQ9Y5P4 624 aa4.29□□□□□ -1.72
SKP1-203ENST00000517625 IRS2Q9Y4H2 1338 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 H7C1D1 291 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 TRAF5O00463 557 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 MAN2B1O00754 1011 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 NCAM1P13591 858 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 BPIP17213 487 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 PMLP29590 882 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 VIPR1P32241 457 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 FNTBP49356 437 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 GALK1P51570 392 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 JAM2P57087 298 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 IRF9Q00978 393 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 TUSC3Q13454 348 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 ZNF174Q15697 407 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 ETV3LQ6ZN32 361 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 TMC6Q7Z403 805 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 C11orf74Q86VG3 221 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 PTRH1Q86Y79 214 aaKnown RBP4.28□□□□□ -1.72
SKP1-203ENST00000517625 PASD1Q8IV76 773 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 EFHBQ8N7U6 833 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 FBXO15Q8NCQ5 510 aaPredicted RBP4.28□□□□□ -1.72
SKP1-203ENST00000517625 BHLHE22Q8NFJ8 381 aaPredicted RBP4.28□□□□□ -1.72
SKP1-203ENST00000517625 LEO1Q8WVC0 666 aaPredicted RBP4.28□□□□□ -1.72
SKP1-203ENST00000517625 ALG3Q92685 438 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 USP7Q93009 1102 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 LIN37Q96GY3 246 aaPredicted RBP4.28□□□□□ -1.72
SKP1-203ENST00000517625 TTC1Q99614 292 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 YIPF4Q9BSR8 244 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 NSUN3Q9H649 340 aaKnown RBP4.28□□□□□ -1.72
SKP1-203ENST00000517625 IFT22Q9H7X7 185 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 PCDH12Q9NPG4 1184 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 ACSS2Q9NR19 701 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 KCNH7Q9NS40 1196 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 SIRT5Q9NXA8 310 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 DTLQ9NZJ0 730 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 B3GALT1Q9Y5Z6 326 aa4.28□□□□□ -1.72
SKP1-203ENST00000517625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.28□□□□□ -1.72
SKP1-203ENST00000517625 hCG_2014768A0A024R1R8 64 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 TCRBV5S4A2TA0A5A2 114 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 PTPDC1A2A3K4 754 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 LRRC10BA6NIK2 292 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 CYP17A1P05093 508 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 COL6A2P12110 1019 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 PFKLP17858 780 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 KRT15P19012 456 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 FBLN1P23142 703 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 SDHAP31040 664 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 SRSF3P84103 164 aaKnown RBP4.27□□□□□ -1.73
SKP1-203ENST00000517625 FAPQ12884 760 aa4.27□□□□□ -1.73
SKP1-203ENST00000517625 PCBP1Q15365 356 aaKnown RBP eCLIP4.27□□□□□ -1.73
SKP1-203ENST00000517625 SEPT7Q16181 437 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms