RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SETQ01105 290 aaPredicted RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 GRIN1Q05586 938 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 PTGDRQ13258 359 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 ORC2Q13416 577 aaPredicted RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 TTLL4Q14679 1199 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 CELF3Q5SZQ8 465 aaKnown RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 SENP7Q9BQF6 1050 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 ZNF577Q9BSK1 485 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLN8-202ENST00000517514 UPF3AQ9H1J1 476 aaKnown RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 DDX20Q9UHI6 824 aaKnown RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 FAM184BQ9ULE4 1060 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 SYNRGQ9UMZ2 1314 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 GSTTP1A0A1W2PQM5 241 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 EML1O00423 815 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 TBX3O15119 743 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 ADAMTS4O75173 837 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 DUSP11O75319 330 aaKnown RBP11.19□□□□□ -0.62
CLN8-202ENST00000517514 GGPS1O95749 300 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 CNGA1P29973 690 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
CLN8-202ENST00000517514 CEBPZQ03701 1054 aaKnown RBP11.19□□□□□ -0.62
CLN8-202ENST00000517514 CALCRLQ16602 461 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 HSDL1Q3SXM5 330 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 KCNV1Q6PIU1 500 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 CYFIP1Q7L576 1253 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 LINC00301Q8NCQ3 95 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 TNPO1Q92973 898 aaKnown RBP11.19□□□□□ -0.62
CLN8-202ENST00000517514 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
CLN8-202ENST00000517514 FAM20AQ96MK3 541 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 NAP1L4Q99733 375 aaKnown RBP11.19□□□□□ -0.62
CLN8-202ENST00000517514 UNC45AQ9H3U1 944 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
CLN8-202ENST00000517514 POLR3EQ9NVU0 708 aa11.19□□□□□ -0.62
CLN8-202ENST00000517514 MORC2Q9Y6X9 1032 aaPredicted RBP11.19□□□□□ -0.62
CLN8-202ENST00000517514 MYH9P35579 1960 aaKnown RBP11.18□□□□□ -0.62
CLN8-202ENST00000517514 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
CLN8-202ENST00000517514 NKRFO15226 690 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLN8-202ENST00000517514 DYNC1LI2O43237 492 aaPredicted RBP11.18□□□□□ -0.62
CLN8-202ENST00000517514 ATG7O95352 703 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 PGK1P00558 417 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 OR52Z1P0C646 297 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 HOXD8P13378 290 aaPredicted RBP11.18□□□□□ -0.62
CLN8-202ENST00000517514 GJA9P57773 515 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 LRCH2Q5VUJ6 765 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 CCSAPQ6IQ19 270 aaPredicted RBP11.18□□□□□ -0.62
CLN8-202ENST00000517514 METTL7BQ6UX53 244 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 TLK2Q86UE8 772 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 KLHDC9Q8NEP7 349 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 CDHR1Q96JP9 859 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 PCYT2Q99447 389 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 RIT2Q99578 217 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 CRISPLD2Q9H0B8 497 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 FBXO2Q9UK22 296 aaPredicted RBP11.18□□□□□ -0.62
CLN8-202ENST00000517514 RCOR1Q9UKL0 485 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 Q9Y3F1 56 aa11.18□□□□□ -0.62
CLN8-202ENST00000517514 SCN10AQ9Y5Y9 1956 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 MKI67P46013 3256 aaKnown RBP11.17□□□□□ -0.62
CLN8-202ENST00000517514 A6NJR5 290 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 YEATS4O95619 227 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 GH1P01241 217 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 MARCKSP29966 332 aaPredicted RBP11.17□□□□□ -0.62
CLN8-202ENST00000517514 PRPHP41219 470 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 TXKP42681 527 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 BEX3Q00994 111 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 PPP2R5CQ13362 524 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 NEDD9Q14511 834 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 ABHD15Q6UXT9 468 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
CLN8-202ENST00000517514 OR6J1Q8NGC5 347 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 LEO1Q8WVC0 666 aaPredicted RBP11.17□□□□□ -0.62
CLN8-202ENST00000517514 ZNF396Q96N95 335 aaPredicted RBP11.17□□□□□ -0.62
CLN8-202ENST00000517514 DEFB118Q96PH6 123 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 GPR20Q99678 358 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 MMTAG2Q9BU76 263 aaKnown RBP11.17□□□□□ -0.62
CLN8-202ENST00000517514 RNF208Q9H0X6 261 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 TTC12Q9H892 705 aaPredicted RBP11.17□□□□□ -0.62
CLN8-202ENST00000517514 TBC1D22BQ9NU19 505 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 SLC9A2Q9UBY0 812 aa11.17□□□□□ -0.62
CLN8-202ENST00000517514 ARID2Q68CP9 1835 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 IGKV6D-21A0A0A0MT36 114 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 POTEMA6NI47 508 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 GAS7O60861 476 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 MMP3P08254 477 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 RARBP10826 455 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLN8-202ENST00000517514 ACTR2P61160 394 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 LAMC2Q13753 1193 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 LRRC41Q15345 812 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 AXDND1Q5T1B0 1012 aaPredicted RBP11.16□□□□□ -0.62
CLN8-202ENST00000517514 ATL3Q6DD88 541 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 ZNF746Q6NUN9 644 aaPredicted RBP11.16□□□□□ -0.62
CLN8-202ENST00000517514 CLEC17AQ6ZS10 378 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 USP49Q70CQ1 688 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 IGSF22Q8N9C0 903 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 PPTC7Q8NI37 304 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms